RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 POLR3CQ9BUI4 534 aaPredicted RBP3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 CAPS2Q9BXY5 557 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 TSGA10Q9BZW7 698 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 MMADHCQ9H3L0 296 aaPredicted RBP3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 CENPHQ9H3R5 247 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 CATSPERBQ9H7T0 1116 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 ACAD9Q9H845 621 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 ZNF304Q9HCX3 659 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 KRCC1Q9NPI7 259 aaPredicted RBP3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 TRPV5Q9NQA5 729 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 HIF1ANQ9NWT6 349 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 TMCO1Q9UM00 188 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 OSGIN2Q9Y236 505 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 RAP2CQ9Y3L5 183 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 GMEB1Q9Y692 573 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 MAGI2Q86UL8 1455 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 FANCD2Q9BXW9 1451 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 ADGBQ8N7X0 1667 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 EVPLQ92817 2033 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 IQGAP2Q13576 1575 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 EFCAB6Q5THR3 1501 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CUL7Q14999 1698 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 RPS10-NUDT3A0A1W2PQS6 291 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 LRRD1A4D1F6 860 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CTAGE15A4D2H0 777 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 ENO4A6NNW6 628 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 HMGB1P1B2RPK0 211 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 LINC01565O15544 149 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 WDHD1O75717 1129 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 PENKP01210 267 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CYP1A2P05177 515 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 MMP3P08254 477 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CSF1P09603 554 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CTAGE8P0CG41 777 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 VDRP11473 427 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 HSD3B1P14060 373 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 HOXB2P14652 356 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 PAX3P23760 479 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 YWHAQP27348 245 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 KIF5BP33176 963 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 GAS1P54826 345 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 AKAP17AQ02040 695 aaKnown RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 ZBTB16Q05516 673 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 BYSLQ13895 437 aaKnown RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 TAF12Q16514 161 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 WASHC2DQ5SRD0 308 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 OTUD1Q5VV17 481 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CCDC70Q6NSX1 233 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CCDC121Q6ZUS5 278 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CTAGE6Q86UF2 777 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 PALB2Q86YC2 1186 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 TMC8Q8IU68 726 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CTAGE4Q8IX94 777 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CCDC65Q8IXS2 484 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CCDC13Q8IYE1 715 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 ZDHHC23Q8IYP9 409 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 SCAIQ8N9R8 606 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CMASQ8NFW8 434 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 MORC4Q8TE76 937 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 C2CD4CQ8TF44 421 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 MIB2Q96AX9 1013 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 RPGRIP1Q96KN7 1286 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 PRAM1Q96QH2 718 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 NAP1L3Q99457 506 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 BPIFA3Q9BQP9 254 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 NPLQ9BXD5 320 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 B3GNT4Q9C0J1 378 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 ISCUQ9H1K1 167 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 MAP6D1Q9H9H5 199 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 EBF2Q9HAK2 575 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 IL21RQ9HBE5 538 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 SLC40A1Q9NP59 571 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 SIRT3Q9NTG7 399 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 ZDHHC7Q9NXF8 308 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 NCKIPSDQ9NZQ3 722 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 UPB1Q9UBR1 384 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CIDEBQ9UHD4 219 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 FEM1BQ9UK73 627 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 ICAM5Q9UMF0 924 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 TNNQ9UQP3 1299 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 GDAQ9Y2T3 454 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 C15orf41Q9Y2V0 281 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 PTCH1Q13635 1447 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 TTC21AQ8NDW8 1320 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 RNF17Q9BXT8 1623 aaKnown RBP3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 TRBV5-7A0A0A0MS05 114 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 FRMD3A2A2Y4 597 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 TARSL2A2RTX5 802 aaKnown RBP3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 OR6C68A6NDL8 312 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 CFAP73A6NFT4 308 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 B4DLN1 442 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 STX16-NPEPL1H3BU86 382 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 STX16O14662 325 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 MGRN1O60291 552 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 SMIM24O75264 130 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 GAS8-AS1O95177 125 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 CBX6O95503 412 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 DDAH2O95865 285 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 GSTA1P08263 222 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 WEE2P0C1S8 567 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms