RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 POLR3CQ9BUI4 534 aaPredicted RBP3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 CAPS2Q9BXY5 557 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 TSGA10Q9BZW7 698 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 MMADHCQ9H3L0 296 aaPredicted RBP3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 CENPHQ9H3R5 247 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 CATSPERBQ9H7T0 1116 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 ACAD9Q9H845 621 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 ZNF304Q9HCX3 659 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 KRCC1Q9NPI7 259 aaPredicted RBP3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 TRPV5Q9NQA5 729 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 HIF1ANQ9NWT6 349 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 TMCO1Q9UM00 188 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 OSGIN2Q9Y236 505 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 RAP2CQ9Y3L5 183 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 GMEB1Q9Y692 573 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 MAGI2Q86UL8 1455 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 FANCD2Q9BXW9 1451 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 ADGBQ8N7X0 1667 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 EVPLQ92817 2033 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 IQGAP2Q13576 1575 aa3.51□□□□□ -1.85
SDCBPP3-201ENST00000419629 EFCAB6Q5THR3 1501 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CUL7Q14999 1698 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 RPS10-NUDT3A0A1W2PQS6 291 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 LRRD1A4D1F6 860 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CTAGE15A4D2H0 777 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 ENO4A6NNW6 628 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 HMGB1P1B2RPK0 211 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 LINC01565O15544 149 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 WDHD1O75717 1129 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 PENKP01210 267 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CYP1A2P05177 515 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 MMP3P08254 477 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CSF1P09603 554 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CTAGE8P0CG41 777 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 VDRP11473 427 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 HSD3B1P14060 373 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 HOXB2P14652 356 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 PAX3P23760 479 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 YWHAQP27348 245 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 KIF5BP33176 963 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 GAS1P54826 345 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 AKAP17AQ02040 695 aaKnown RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 ZBTB16Q05516 673 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 BYSLQ13895 437 aaKnown RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 TAF12Q16514 161 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 WASHC2DQ5SRD0 308 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 OTUD1Q5VV17 481 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CCDC70Q6NSX1 233 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CCDC121Q6ZUS5 278 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CTAGE6Q86UF2 777 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 PALB2Q86YC2 1186 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 TMC8Q8IU68 726 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CTAGE4Q8IX94 777 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CCDC65Q8IXS2 484 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CCDC13Q8IYE1 715 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 ZDHHC23Q8IYP9 409 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 SCAIQ8N9R8 606 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CMASQ8NFW8 434 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 MORC4Q8TE76 937 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 C2CD4CQ8TF44 421 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 MIB2Q96AX9 1013 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 RPGRIP1Q96KN7 1286 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 PRAM1Q96QH2 718 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 NAP1L3Q99457 506 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 BPIFA3Q9BQP9 254 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 NPLQ9BXD5 320 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 B3GNT4Q9C0J1 378 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 ISCUQ9H1K1 167 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 MAP6D1Q9H9H5 199 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 EBF2Q9HAK2 575 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 IL21RQ9HBE5 538 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 SLC40A1Q9NP59 571 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 SIRT3Q9NTG7 399 aaPredicted RBP3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 ZDHHC7Q9NXF8 308 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 NCKIPSDQ9NZQ3 722 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 UPB1Q9UBR1 384 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 CIDEBQ9UHD4 219 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 FEM1BQ9UK73 627 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 ICAM5Q9UMF0 924 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 TNNQ9UQP3 1299 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 GDAQ9Y2T3 454 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 C15orf41Q9Y2V0 281 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 PTCH1Q13635 1447 aa3.5□□□□□ -1.85
SDCBPP3-201ENST00000419629 TTC21AQ8NDW8 1320 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 RNF17Q9BXT8 1623 aaKnown RBP3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 TRBV5-7A0A0A0MS05 114 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 FRMD3A2A2Y4 597 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 TARSL2A2RTX5 802 aaKnown RBP3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 OR6C68A6NDL8 312 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 CFAP73A6NFT4 308 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 B4DLN1 442 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 STX16-NPEPL1H3BU86 382 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 STX16O14662 325 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 MGRN1O60291 552 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 SMIM24O75264 130 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 GAS8-AS1O95177 125 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 CBX6O95503 412 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 DDAH2O95865 285 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 GSTA1P08263 222 aa3.49□□□□□ -1.85
SDCBPP3-201ENST00000419629 WEE2P0C1S8 567 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms