RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 EME1Q96AY2 570 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 ZNF778Q96MU6 729 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 PBX4Q9BYU1 374 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 SLC13A1Q9BZW2 595 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 CCDC68Q9H2F9 335 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 RNF11Q9Y3C5 154 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 A0A1B0GTW7 788 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 BCLAF3A2AJT9 711 aaKnown RBP13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 C2orf78A6NCI8 922 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 K7EPI3 171 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 HMBSP08397 361 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 COX4I1P13073 169 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 ESRRGP62508 458 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 MRPS22P82650 360 aaKnown RBP13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 GPM6BQ13491 265 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 SEPT6Q14141 434 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 FLOT2Q14254 428 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 FSCBQ5H9T9 825 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 MS4A13Q5J8X5 152 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 PDE12Q6L8Q7 609 aaKnown RBP13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 RTL10Q7L3V2 364 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 GPR141Q7Z602 305 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 TMC8Q8IU68 726 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 GALNT4Q8N4A0 578 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 ATP6V0D2Q8N8Y2 350 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 FAM71DQ8N9W8 422 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 RSAD2Q8WXG1 361 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 SHCBP1LQ9BZQ2 653 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 NACA2Q9H009 215 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 RNF38Q9H0F5 515 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 COPS7BQ9H9Q2 264 aaPredicted RBP13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 PNPLA3Q9NST1 481 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 TRNAU1APQ9NX07 287 aaKnown RBP13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 EPS15L1Q9UBC2 864 aa13.36□□□□□ -0.27
SFTPA1-202ENST00000419470 NOTCH4Q99466 2003 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 PRSS51A0A1B0GVH4 220 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 E9PAM4 449 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 LSM1O15116 133 aaKnown RBP13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 C1QAP02745 245 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 IDH3AP50213 366 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 KCNQ1P51787 676 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 MTM1Q13496 603 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 INAQ16352 499 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 MFSD4BQ5TF39 518 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 NEPROQ6NW34 567 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 ZCCHC23Q6ZST2 131 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 GAREM2Q75VX8 874 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 C14orf80Q86SX3 495 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 CARM1Q86X55 608 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 ZNF683Q8IZ20 524 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 LILRA2Q8N149 483 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 NPWQ8N729 165 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 PPM1NQ8N819 430 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 SLC22A17Q8WUG5 538 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 RTP4Q96DX8 246 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 RMND5BQ96G75 393 aaPredicted RBP13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 OSBPL11Q9BXB4 747 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 GNPTGQ9UJJ9 305 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 VPS28Q9UK41 221 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 LOC100653049A0A140TA62 436 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 CNOT3O75175 753 aaKnown RBP13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 KRT34O76011 436 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 KRT38O76015 456 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 ZBTB11O95625 1053 aaPredicted RBP13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 OXSR1O95747 527 aaPredicted RBP13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 NFKBIAP25963 317 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 EIF2B2P49770 351 aaKnown RBP13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 NDST2P52849 883 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 RPS3AP61247 264 aaKnown RBP13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 CBLBQ13191 982 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 ZBED5Q49AG3 693 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 PPM1LQ5SGD2 360 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 TEDDM1Q5T9Z0 273 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 MBLAC2Q68D91 279 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 CDKL3Q8IVW4 592 aaPredicted RBP13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 CTAGE3PQ8IX95 158 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 GSDMBQ8TAX9 411 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 C12orf43Q96C57 262 aaKnown RBP13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 THAP11Q96EK4 314 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 QKIQ96PU8 341 aaKnown RBP eCLIP13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 MAN1C1Q9NR34 630 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 GIN1Q9NXP7 522 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 RAD54BQ9Y620 910 aa13.35□□□□□ -0.27
SFTPA1-202ENST00000419470 HACD1B0YJ81 288 aa13.34□□□□□ -0.27
SFTPA1-202ENST00000419470 PSMD12O00232 456 aaPredicted RBP13.34□□□□□ -0.27
SFTPA1-202ENST00000419470 FGF10O15520 208 aaPredicted RBP13.34□□□□□ -0.27
SFTPA1-202ENST00000419470 STAMBPO95630 424 aa13.34□□□□□ -0.27
SFTPA1-202ENST00000419470 INHBBP09529 407 aa13.34□□□□□ -0.27
SFTPA1-202ENST00000419470 EPCAMP16422 314 aa13.34□□□□□ -0.27
SFTPA1-202ENST00000419470 GABRR2P28476 465 aa13.34□□□□□ -0.27
SFTPA1-202ENST00000419470 RBL1P28749 1068 aa13.34□□□□□ -0.27
SFTPA1-202ENST00000419470 STXBP5Q5T5C0 1151 aa13.34□□□□□ -0.27
SFTPA1-202ENST00000419470 C16orf87Q6PH81 154 aa13.34□□□□□ -0.27
SFTPA1-202ENST00000419470 C16orf89Q6UX73 402 aa13.34□□□□□ -0.27
SFTPA1-202ENST00000419470 PDZD4Q76G19 769 aaPredicted RBP13.34□□□□□ -0.27
SFTPA1-202ENST00000419470 CLVS1Q8IUQ0 354 aaPredicted RBP13.34□□□□□ -0.27
SFTPA1-202ENST00000419470 TP53INP2Q8IXH6 220 aa13.34□□□□□ -0.27
SFTPA1-202ENST00000419470 HS6ST3Q8IZP7 471 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms