RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 ACP1P24666 158 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 ETV3P41162 512 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 CD86P42081 329 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 HK3P52790 923 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 EPHB1P54762 984 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 NAP1L1P55209 391 aaKnown RBP20.33■□□□□ 0.85
GTF3A-202ENST00000419181 KIAA1024LP59773 190 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 SMAD1Q15797 465 aaKnown RBP20.33■□□□□ 0.85
GTF3A-202ENST00000419181 ALG11Q2TAA5 492 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 FAM182AQ5T1J6 154 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 DENND2CQ68D51 928 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 PNCKQ6P2M8 343 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 CRTC1Q6UUV9 634 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 B4GALNT4Q76KP1 1039 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 FAM181AQ8N9Y4 354 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 KIAA1524Q8TCG1 905 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 LMX1AQ8TE12 382 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 FUBP1Q96AE4 644 aaKnown RBP20.33■□□□□ 0.85
GTF3A-202ENST00000419181 SLC13A1Q9BZW2 595 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 SEPT10Q9P0V9 454 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 PCDHA3Q9Y5H8 950 aa20.33■□□□□ 0.85
GTF3A-202ENST00000419181 LY6G6EA0A0G2JKS1 128 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 A0A0U1RQS6 177 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 GRID2IPA4D2P6 1211 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 GCATO75600 419 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 HOXC4P09017 264 aaPredicted RBP20.32■□□□□ 0.84
GTF3A-202ENST00000419181 CKMT1AP12532 417 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 BLKP51451 505 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 ILKQ13418 452 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 PRRT3Q5FWE3 981 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 FAXCQ5TGI0 409 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 LRRC66Q68CR7 880 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 ENPP7Q6UWV6 458 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 CCNI2Q6ZMN8 369 aaPredicted RBP20.32■□□□□ 0.84
GTF3A-202ENST00000419181 NYAP1Q6ZVC0 841 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 Q6ZVL8 140 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 BBS12Q6ZW61 710 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 GALNT15Q8N3T1 639 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 LPCAT1Q8NF37 534 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 ATL2Q8NHH9 583 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 TFB1MQ8WVM0 346 aaKnown RBP20.32■□□□□ 0.84
GTF3A-202ENST00000419181 P3H4Q92791 437 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 IMP4Q96G21 291 aaKnown RBP20.32■□□□□ 0.84
GTF3A-202ENST00000419181 APOLD1Q96LR9 279 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 WDR92Q96MX6 357 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 AGAP3Q96P47 875 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 LYSMD1Q96S90 227 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 DESI2Q9BSY9 194 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 WDR26Q9H7D7 661 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 U3KQA8 63 aa20.32■□□□□ 0.84
GTF3A-202ENST00000419181 CCDC66A2RUB6 948 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 GOLGA6L6A8MZA4 724 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 CACNB4O00305 520 aaPredicted RBP20.31■□□□□ 0.84
GTF3A-202ENST00000419181 TPP1O14773 563 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 RASGRP1O95267 797 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 TSHRP16473 764 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 ZNF30P17039 623 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 PTPN3P26045 913 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 CTNNA2P26232 953 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 SRP54P61011 504 aaKnown RBP20.31■□□□□ 0.84
GTF3A-202ENST00000419181 COPS2P61201 443 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 DAB2P98082 770 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 DEFB133Q30KQ1 61 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 TEX44Q53QW1 395 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 KCTD16Q68DU8 428 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 ZCCHC8Q6NZY4 707 aaKnown RBP20.31■□□□□ 0.84
GTF3A-202ENST00000419181 TECPR1Q7Z6L1 1165 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 HID1Q8IV36 788 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 TXLNBQ8N3L3 684 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 TSACCQ96A04 125 aaPredicted RBP20.31■□□□□ 0.84
GTF3A-202ENST00000419181 TADA1Q96BN2 335 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 LGR4Q9BXB1 951 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 CLPBQ9H078 707 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 SLC25A51Q9H1U9 297 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 KLQ9UEF7 1012 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 DNPEPQ9ULA0 475 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 WDFY3Q8IZQ1 3526 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 KNTC1P50748 2209 aa20.31■□□□□ 0.84
GTF3A-202ENST00000419181 A0A0U1RQJ8 604 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 TMEM202A6NGA9 273 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 LMO7DNF2Z398 122 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 KELP23276 732 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 PTSQ03393 145 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 DPTQ07507 201 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 WASHC5Q12768 1159 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 KIF5AQ12840 1032 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 C1orf61Q13536 156 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 SLC14A2Q15849 920 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 NT5DC3Q86UY8 548 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 FSTL5Q8N475 847 aaPredicted RBP20.3■□□□□ 0.84
GTF3A-202ENST00000419181 OR56A4Q8NGH8 313 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 ALG3Q92685 438 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 HAUS1Q96CS2 278 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 PDXPQ96GD0 296 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 TEKT5Q96M29 485 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 TRIB3Q96RU7 358 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 RBM15Q96T37 977 aaKnown RBP eCLIP20.3■□□□□ 0.84
GTF3A-202ENST00000419181 HERPUD2Q9BSE4 406 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 HEMGNQ9BXL5 484 aa20.3■□□□□ 0.84
GTF3A-202ENST00000419181 TEX101Q9BY14 249 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms