RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 B3GNTL1Q67FW5 361 aaPredicted RBP6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 CYP26C1Q6V0L0 522 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 SLC47A2Q86VL8 602 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 UNC93AQ86WB7 457 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 METTL23Q86XA0 190 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 TMTC1Q8IUR5 882 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 TMEM139Q8IV31 216 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 C1orf210Q8IVY1 113 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 ADGRF2Q8IZF7 708 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 SLC39A11Q8N1S5 342 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 COLGALT1Q8NBJ5 622 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 SLC4A11Q8NBS3 891 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 CCDC112Q8NEF3 446 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 SPATA18Q8TC71 538 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 POF1BQ8WVV4 589 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 DVL3Q92997 716 aaPredicted RBP6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 IGSF21Q96ID5 467 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 TWNKQ96RR1 684 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 BAG1Q99933 345 aaPredicted RBP6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 ELOVL4Q9GZR5 314 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 DNAI2Q9GZS0 605 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 HAUS4Q9H6D7 363 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 AKIP1Q9NQ31 210 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 PARPBPQ9NWS1 579 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 SPG21Q9NZD8 308 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 KIAA1257Q9ULG3 409 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 SHOC2Q9UQ13 582 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 TBC1D30Q9Y2I9 924 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 NOX1Q9Y5S8 564 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 COL4A6Q14031 1691 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 FNDC1Q4ZHG4 1894 aaPredicted RBP6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 TDRD15B5MCY1 1934 aaKnown RBP6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 CEP290O15078 2479 aa6.13□□□□□ -1.43
NIFKP3-201ENST00000417799 PRAMEF33A0A0G2JMD5 474 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 LOC102723971A0A1B0GUV8 181 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 A0A1W2PS29 197 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 A8MXQ7 604 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 AREL1O15033 823 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 PRAMEF10O60809 474 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 SF3B1O75533 1304 aaKnown RBP eCLIP6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 OAZ2O95190 189 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 CALCAP01258 141 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 PLEKP08567 350 aaPredicted RBP6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 LINC00271P0C7V0 271 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 CYP11B1P15538 503 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 ITGALP20701 1170 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 IL1R2P27930 398 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 TKTP29401 623 aaKnown RBP6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 BMPR1AP36894 532 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 PXNP49023 591 aaPredicted RBP6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 PDE6CP51160 858 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 ZNF134P52741 427 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 LOXL3P58215 753 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 CCZ1BP86790 482 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 CCZ1P86791 482 aaPredicted RBP6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 KRT17Q04695 432 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 DYRK1AQ13627 763 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 SLC29A2Q14542 456 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 GRAMD1BQ3KR37 738 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 USP41Q3LFD5 358 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 MGAT5BQ3V5L5 792 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 PREPLQ4J6C6 727 aaPredicted RBP6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 USP39Q53GS9 565 aaKnown RBP6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 TDRD12Q587J7 1177 aaKnown RBP6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 FAM171A1Q5VUB5 890 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 FAM109BQ6ICB4 259 aaPredicted RBP6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 FUT10Q6P4F1 479 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 ZNF571Q7Z3V5 609 aaPredicted RBP6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 TMPRSS9Q7Z410 1059 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 TMEM173Q86WV6 379 aaPredicted RBP6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 ZNF677Q86XU0 584 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 SYTL1Q8IYJ3 562 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 CRYBG2Q8N1P7 616 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 THEM5Q8N1Q8 247 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 IL17DQ8TAD2 202 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 EXTL1Q92935 676 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 ZNF566Q969W8 418 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 RNF31Q96EP0 1072 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 ZNF830Q96NB3 372 aaPredicted RBP6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 CHP1Q99653 195 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 AGPAT1Q99943 283 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 ACBD6Q9BR61 282 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 TTPALQ9BTX7 342 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 CRB3Q9BUF7 120 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 NHEJ1Q9H9Q4 299 aaPredicted RBP6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 ACP6Q9NPH0 428 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 DDX43Q9NXZ2 648 aaKnown RBP6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 HMGXB4Q9UGU5 601 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 NME7Q9Y5B8 376 aa6.12□□□□□ -1.43
NIFKP3-201ENST00000417799 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.11□□□□□ -1.43
NIFKP3-201ENST00000417799 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.11□□□□□ -1.43
NIFKP3-201ENST00000417799 LINC01553A4QN01 128 aa6.11□□□□□ -1.43
NIFKP3-201ENST00000417799 CLCA1A8K7I4 914 aa6.11□□□□□ -1.43
NIFKP3-201ENST00000417799 H7C4K7 107 aa6.11□□□□□ -1.43
NIFKP3-201ENST00000417799 RAB27BO00194 218 aa6.11□□□□□ -1.43
NIFKP3-201ENST00000417799 MED7O43513 233 aa6.11□□□□□ -1.43
NIFKP3-201ENST00000417799 HCRTO43612 131 aa6.11□□□□□ -1.43
NIFKP3-201ENST00000417799 ZFPL1O95159 310 aa6.11□□□□□ -1.43
NIFKP3-201ENST00000417799 NDUFA10O95299 355 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms