RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 CERCAMQ5T4B2 595 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 KIAA0895LQ68EN5 471 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 NEK5Q6P3R8 708 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 TSPAN33Q86UF1 283 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 HORMAD1Q86X24 394 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 FAM160A2Q8N612 972 aaPredicted RBP8.47□□□□□ -1.05
TRIM48-201ENST00000417545 LRRN4CLQ8ND94 238 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 BRSK1Q8TDC3 778 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 GAB3Q8WWW8 586 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 RUBCNQ92622 972 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 KLK6Q92876 244 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 FOXJ1Q92949 421 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.47□□□□□ -1.05
TRIM48-201ENST00000417545 ZNF669Q96BR6 464 aaPredicted RBP8.47□□□□□ -1.05
TRIM48-201ENST00000417545 NUS1Q96E22 293 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 STAMBPL1Q96FJ0 436 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 MCCC1Q96RQ3 725 aaPredicted RBP8.47□□□□□ -1.05
TRIM48-201ENST00000417545 FMO2Q99518 471 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 FOXP3Q9BZS1 431 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 TSPYL1Q9H0U9 437 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 MIR1-1HGQ9H1L0 117 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 ARNT2Q9HBZ2 717 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 SAYSD1Q9NPB0 183 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 SYBUQ9NX95 663 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 WSB2Q9NYS7 404 aaPredicted RBP8.47□□□□□ -1.05
TRIM48-201ENST00000417545 DMGDHQ9UI17 866 aaKnown RBP8.47□□□□□ -1.05
TRIM48-201ENST00000417545 GGT7Q9UJ14 662 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 COQ6Q9Y2Z9 468 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 EML5Q05BV3 1969 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 IGLON5A6NGN9 336 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 AREL1O15033 823 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 SLC31A1O15431 190 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 BUD23O43709 281 aaKnown RBP8.46□□□□□ -1.05
TRIM48-201ENST00000417545 AVILO75366 819 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 PRLP01236 227 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 IGLV3-19P01714 112 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 AKT2P31751 481 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 NUDT1P36639 197 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 SPAM1P38567 509 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 DRG2P55039 364 aaKnown RBP8.46□□□□□ -1.05
TRIM48-201ENST00000417545 CRADDP78560 199 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 DHX9Q08211 1270 aaKnown RBP8.46□□□□□ -1.05
TRIM48-201ENST00000417545 SIM2Q14190 667 aaPredicted RBP8.46□□□□□ -1.05
TRIM48-201ENST00000417545 IHHQ14623 411 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 SKIDA1Q1XH10 827 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 MAP7D1Q3KQU3 841 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 WDR45BQ5MNZ6 344 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 ZDHHC20Q5W0Z9 365 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 ALS2CLQ60I27 953 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 RAET1GQ6H3X3 334 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 CRTC1Q6UUV9 634 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 LIPIQ6XZB0 460 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 ARMCX6Q7L4S7 300 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 TRIM69Q86WT6 500 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 PALM2Q8IXS6 379 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 KLHDC8BQ8IXV7 354 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 TMEFF1Q8IYR6 380 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 ZBED8Q8IZ13 594 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 ZCCHC9Q8N567 271 aaKnown RBP8.46□□□□□ -1.05
TRIM48-201ENST00000417545 DEFB119Q8N690 84 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 FBXO25Q8TCJ0 367 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 ART4Q93070 314 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 CFAP36Q96G28 342 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 HSPA12BQ96MM6 686 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 SMIM14Q96QK8 99 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 MYOCQ99972 504 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 NAT9Q9BTE0 207 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 LRFN3Q9BTN0 628 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 SPATA16Q9BXB7 569 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 IRF2BPLQ9H1B7 796 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 PCED1AQ9H1Q7 454 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 C6orf106Q9H6K1 298 aaPredicted RBP8.46□□□□□ -1.05
TRIM48-201ENST00000417545 BPIFA1Q9NP55 256 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 AASDHPPTQ9NRN7 309 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 CD84Q9UIB8 345 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 CHMP2BQ9UQN3 213 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 PPIL1Q9Y3C6 166 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 PCDHGA2Q9Y5H1 932 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 SPO11Q9Y5K1 396 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 ARL5AQ9Y689 179 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 SLC30A1Q9Y6M5 507 aa8.46□□□□□ -1.05
TRIM48-201ENST00000417545 THADAQ6YHU6 1953 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 LRRK1Q38SD2 2015 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 MAGEB16A2A368 324 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 FPGTO14772 594 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 EIF3HO15372 352 aaKnown RBP eCLIP8.46□□□□□ -1.06
TRIM48-201ENST00000417545 RECQL5O94762 991 aaPredicted RBP8.46□□□□□ -1.06
TRIM48-201ENST00000417545 PCCBP05166 539 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 POLBP06746 335 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 C1SP09871 688 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 PGAM1P18669 254 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 LHCGRP22888 699 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 IVDP26440 423 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 ETV3P41162 512 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 CARSP49589 748 aaKnown RBP8.46□□□□□ -1.06
TRIM48-201ENST00000417545 CCR5P51681 352 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 STC1P52823 247 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 TAS2R38P59533 333 aa8.46□□□□□ -1.06
TRIM48-201ENST00000417545 PPP2CBP62714 309 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms