RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 MAP10Q9P2G4 905 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 CNOT6Q9ULM6 557 aaKnown RBP14.5□□□□□ -0.09
HDAC9-208ENST00000417496 AURKCQ9UQB9 309 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 BTRCQ9Y297 605 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.5□□□□□ -0.09
HDAC9-208ENST00000417496 HEMK1Q9Y5R4 338 aaPredicted RBP14.5□□□□□ -0.09
HDAC9-208ENST00000417496 MROH6A6NGR9 719 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 SOCS2O14508 198 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 AKAP10O43572 662 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 LDB2O43679 373 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 ATP6V1B2P21281 511 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 PSMD8P48556 350 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 CDH15P55291 814 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 YWHAHQ04917 246 aaPredicted RBP14.5□□□□□ -0.09
HDAC9-208ENST00000417496 APOFQ13790 326 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 MAP7Q14244 749 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 GALNT3Q14435 633 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 OR4D1Q15615 310 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 DDIASQ8IXT1 998 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 THEM5Q8N1Q8 247 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 AFAP1L2Q8N4X5 818 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 PTGR2Q8N8N7 351 aaPredicted RBP14.5□□□□□ -0.09
HDAC9-208ENST00000417496 OR13C4Q8NGS5 318 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 MYEOVQ96EZ4 313 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 LIN28AQ9H9Z2 209 aaKnown RBP14.5□□□□□ -0.09
HDAC9-208ENST00000417496 SP110Q9HB58 689 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 MID1IP1Q9NPA3 183 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 SARDHQ9UL12 918 aa14.5□□□□□ -0.09
HDAC9-208ENST00000417496 A0A0J9YYE9 177 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 TCRBV3S1A0A5B6 114 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 ANKRD33BA6NCL7 494 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 SAC3D1A6NKF1 404 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 M0QZQ0 153 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 PDLIM1O00151 329 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 PIP5K1BO14986 540 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 MUSKO15146 869 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 CDK14O94921 469 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 GOT2P00505 430 aaKnown RBP14.49□□□□□ -0.09
HDAC9-208ENST00000417496 ASLP04424 464 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 LINC00032P0C843 101 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 GPX3P22352 226 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 MAPRE2Q15555 327 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 B3GNT6Q6ZMB0 384 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 DHFR2Q86XF0 187 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 SPPL2CQ8IUH8 684 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 SLC22A9Q8IVM8 553 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 TRPV1Q8NER1 839 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 TSPAN17Q96FV3 270 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 ZNF597Q96LX8 424 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 NDUFA13Q9P0J0 144 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 SRP72O76094 671 aaKnown RBP14.49□□□□□ -0.09
HDAC9-208ENST00000417496 GNAO1P09471 354 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 ATXN1LP0C7T5 689 aaKnown RBP14.49□□□□□ -0.09
HDAC9-208ENST00000417496 SLC7A1P30825 629 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 SLC5A2P31639 672 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 APLP1P51693 650 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 HERVK_113P63132 956 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 SLC14A2Q15849 920 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 RAP1GAP2Q684P5 730 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 ZNF280BQ86YH2 543 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 SCML4Q8N228 414 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 KLHDC9Q8NEP7 349 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 TSPAN14Q8NG11 270 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 ARRDC2Q8TBH0 407 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 TRPC4APQ8TEL6 797 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 ZFRQ96KR1 1074 aaKnown RBP14.49□□□□□ -0.09
HDAC9-208ENST00000417496 B3GALT6Q96L58 329 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 ERVK-6Q9BXR3 956 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 TUBB1Q9H4B7 451 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 VPS45Q9NRW7 570 aa14.49□□□□□ -0.09
HDAC9-208ENST00000417496 NME4O00746 187 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 GPR182O15218 404 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 SLC7A4O43246 635 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 WISP3O95389 354 aaPredicted RBP14.48□□□□□ -0.09
HDAC9-208ENST00000417496 CD1DP15813 335 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 CAPN3P20807 821 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 CES1P23141 567 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 ACVRL1P37023 503 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 HSPA13P48723 471 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 TBX4P57082 545 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 SAMD4BQ5PRF9 694 aaKnown RBP14.48□□□□□ -0.09
HDAC9-208ENST00000417496 FBXL22Q6P050 247 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 ZBTB49Q6ZSB9 765 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 MRPL10Q7Z7H8 261 aaKnown RBP14.48□□□□□ -0.09
HDAC9-208ENST00000417496 UMODL1-AS1Q8N2C9 162 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 SERPINB11Q96P15 392 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 SMIM14Q96QK8 99 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 SEMA3CQ99985 751 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 ZYG11BQ9C0D3 744 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 OLAHQ9NV23 265 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 PTTG2Q9NZH5 202 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 GMIPQ9P107 970 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 FAM50BQ9Y247 325 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 CCDC162PA2VCL2 907 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 SLC2A3P11169 496 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 MTHFD2P13995 350 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 STX1BP61266 288 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 PRKCQQ04759 706 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 TUSC3Q13454 348 aa14.48□□□□□ -0.09
HDAC9-208ENST00000417496 MAP7D1Q3KQU3 841 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms