RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 RECQL5O94762 991 aaPredicted RBP13.78□□□□□ -0.2
SSB-204ENST00000417292 LRIG2O94898 1065 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 FUCA1P04066 466 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 HOXC4P09017 264 aaPredicted RBP13.78□□□□□ -0.2
SSB-204ENST00000417292 CCNB1P14635 433 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 GM2AP17900 193 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 GNLYP22749 145 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 KELP23276 732 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 ADRA1BP35368 520 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 TRIM23P36406 574 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 GPR3P46089 330 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 ATP11AP98196 1134 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 SQSTM1Q13501 440 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 INO80DQ53TQ3 878 aaPredicted RBP13.78□□□□□ -0.2
SSB-204ENST00000417292 CAPRIN2Q6IMN6 1127 aaKnown RBP13.78□□□□□ -0.2
SSB-204ENST00000417292 FAM129CQ86XR2 697 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 NLGN4XQ8N0W4 816 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 NLGN4YQ8NFZ3 816 aaPredicted RBP13.78□□□□□ -0.2
SSB-204ENST00000417292 HCAR2Q8TDS4 363 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 STARD8Q92502 1023 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 KIAA1143Q96AT1 154 aaPredicted RBP13.78□□□□□ -0.2
SSB-204ENST00000417292 C18orf8Q96DM3 657 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 RTP4Q96DX8 246 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 FAM81BQ96LP2 452 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 CTRCQ99895 268 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 SUV39H2Q9H5I1 410 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 RETREG1Q9H6L5 497 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 SUDS3Q9H7L9 328 aaPredicted RBP13.78□□□□□ -0.2
SSB-204ENST00000417292 FAM207AQ9NSI2 230 aaPredicted RBP13.78□□□□□ -0.2
SSB-204ENST00000417292 TAAR2Q9P1P5 351 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 MOSPD1Q9UJG1 213 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 ATP8A1Q9Y2Q0 1164 aa13.78□□□□□ -0.2
SSB-204ENST00000417292 IGHV1OR21-1A0A087WYE8 117 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 GOLGA8SH3BPF8 625 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 PPM1DO15297 605 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 BUB1BO60566 1050 aaPredicted RBP13.77□□□□□ -0.21
SSB-204ENST00000417292 UCHL3P15374 230 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 AK4P27144 223 aaPredicted RBP13.77□□□□□ -0.21
SSB-204ENST00000417292 MAP4P27816 1152 aaKnown RBP13.77□□□□□ -0.21
SSB-204ENST00000417292 CDH5P33151 784 aaPredicted RBP13.77□□□□□ -0.21
SSB-204ENST00000417292 STAT1P42224 750 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 RAB15P59190 212 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 RALGDSQ12967 914 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 CYTH1Q15438 398 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 FHL5Q5TD97 284 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 ERAP2Q6P179 960 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 NRSN1Q8IZ57 195 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 EMC1Q8N766 993 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 TEX19Q8NA77 164 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 TMEM35BQ8NCS4 154 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 SSC4DQ8WTU2 575 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 PTCD2Q8WV60 388 aaKnown RBP13.77□□□□□ -0.21
SSB-204ENST00000417292 CASKIN2Q8WXE0 1202 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 NCAPGQ9BPX3 1015 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 NAA15Q9BXJ9 866 aaKnown RBP13.77□□□□□ -0.21
SSB-204ENST00000417292 LIMA1Q9UHB6 759 aaKnown RBP13.77□□□□□ -0.21
SSB-204ENST00000417292 KCNMB2Q9Y691 235 aa13.77□□□□□ -0.21
SSB-204ENST00000417292 ZW10O43264 779 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 SEMA7AO75326 666 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 TPM2P07951 284 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 POLR2FP61218 127 aaKnown RBP13.76□□□□□ -0.21
SSB-204ENST00000417292 UBXN1Q04323 297 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 SEPT6Q14141 434 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 SYCP1Q15431 976 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 C15orf59Q2T9L4 293 aaPredicted RBP13.76□□□□□ -0.21
SSB-204ENST00000417292 FKBP15Q5T1M5 1219 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 TAF3Q5VWG9 929 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 C16orf46Q6P387 395 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 APTXQ7Z2E3 356 aaKnown RBP13.76□□□□□ -0.21
SSB-204ENST00000417292 ZNF354CQ86Y25 554 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 CAMK1DQ8IU85 385 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 FAM71AQ8IYT1 594 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 NAGSQ8N159 534 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 TBC1D31Q96DN5 1066 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 PCMTD1Q96MG8 357 aaPredicted RBP13.76□□□□□ -0.21
SSB-204ENST00000417292 NAT10Q9H0A0 1025 aaKnown RBP13.76□□□□□ -0.21
SSB-204ENST00000417292 GANQ9H2C0 597 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 WDR26Q9H7D7 661 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 CARS2Q9HA77 564 aaKnown RBP13.76□□□□□ -0.21
SSB-204ENST00000417292 NLRC4Q9NPP4 1024 aa13.76□□□□□ -0.21
SSB-204ENST00000417292 MRPS18BQ9Y676 258 aaKnown RBP13.76□□□□□ -0.21
SSB-204ENST00000417292 A1L4Q6 167 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 CFAP69A5D8W1 941 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 LGALS16A8MUM7 142 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 TEX33O43247 280 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 VPS4BO75351 444 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 CEACAM5P06731 702 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 PLEKP08567 350 aaPredicted RBP13.75□□□□□ -0.21
SSB-204ENST00000417292 TCN2P20062 427 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 F8A1P23610 371 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 ZNF165P49910 485 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 ABHD18Q0P651 414 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 ILF3Q12906 894 aaKnown RBP eCLIP13.75□□□□□ -0.21
SSB-204ENST00000417292 CDO1Q16878 200 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 TSR1Q2NL82 804 aaKnown RBP13.75□□□□□ -0.21
SSB-204ENST00000417292 CRTC2Q53ET0 693 aaPredicted RBP13.75□□□□□ -0.21
SSB-204ENST00000417292 ZNF787Q6DD87 383 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 TCTN3Q6NUS6 607 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 PNCKQ6P2M8 343 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 TMEM71Q6P5X7 295 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms