RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 WASH4PA8MWX3 477 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 A8MX80 341 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 J3KR12 359 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 CAPN5O15484 640 aaPredicted RBP10.04□□□□□ -0.8
MDC1-202ENST00000416571 CCP110O43303 1012 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 PRAMEF11O60813 436 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 ECEL1O95672 775 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 GOLGA6DP0CG33 693 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 FGF3P11487 239 aaPredicted RBP10.04□□□□□ -0.8
MDC1-202ENST00000416571 GP1BBP13224 206 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 LIFP15018 202 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 NFKBIAP25963 317 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 UGT1A3P35503 534 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 CASRP41180 1078 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 NOP2P46087 812 aaKnown RBP10.04□□□□□ -0.8
MDC1-202ENST00000416571 GPR3P46089 330 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 GNPDA1P46926 289 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 CSNK1DP48730 415 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 NDST2P52849 883 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 FMO1Q01740 532 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 DCAF12Q5T6F0 453 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 PNCKQ6P2M8 343 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 DNAJC24Q6P3W2 148 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 SLC30A9Q6PML9 568 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 FAM129CQ86XR2 697 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 NRSN1Q8IZ57 195 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 TSEN2Q8NCE0 465 aaKnown RBP10.04□□□□□ -0.8
MDC1-202ENST00000416571 C3orf20Q8ND61 904 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 OR4D9Q8NGE8 314 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 C9orf43Q8TAL5 461 aaPredicted RBP10.04□□□□□ -0.8
MDC1-202ENST00000416571 KIAA1143Q96AT1 154 aaPredicted RBP10.04□□□□□ -0.8
MDC1-202ENST00000416571 NUS1Q96E22 293 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 CELF6Q96J87 481 aaKnown RBP10.04□□□□□ -0.8
MDC1-202ENST00000416571 DPYSL5Q9BPU6 564 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 DDA1Q9BW61 102 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 SP110Q9HB58 689 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 PDFQ9HBH1 243 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 SEPT11Q9NVA2 429 aaKnown RBP10.04□□□□□ -0.8
MDC1-202ENST00000416571 TRNAU1APQ9NX07 287 aaKnown RBP10.04□□□□□ -0.8
MDC1-202ENST00000416571 KCTD5Q9NXV2 234 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 SLC39A1Q9NY26 324 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 GOLGA6AQ9NYA3 693 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 TAAR2Q9P1P5 351 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 ANAPC2Q9UJX6 822 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 FZD10Q9ULW2 581 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 FBN2P35556 2912 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 SIGLEC16A6NMB1 481 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 DAPK3O43293 454 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 RAD1O60671 282 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 FGF1P05230 155 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 TPM2P07951 284 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 UNGP13051 313 aaPredicted RBP10.03□□□□□ -0.8
MDC1-202ENST00000416571 AK4P27144 223 aaPredicted RBP10.03□□□□□ -0.8
MDC1-202ENST00000416571 ERCC5P28715 1186 aaPredicted RBP10.03□□□□□ -0.8
MDC1-202ENST00000416571 CD1CP29017 333 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 MAN1A1P33908 653 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 HTR7P34969 479 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 SOX5P35711 763 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 RGRP47804 291 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 PAPOLAP51003 745 aaKnown RBP10.03□□□□□ -0.8
MDC1-202ENST00000416571 SCNN1BP51168 640 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 ZNF143P52747 638 aaPredicted RBP10.03□□□□□ -0.8
MDC1-202ENST00000416571 LIMK2P53671 638 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 GSCP56915 257 aaPredicted RBP10.03□□□□□ -0.8
MDC1-202ENST00000416571 RAB15P59190 212 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 POLR2FP61218 127 aaKnown RBP10.03□□□□□ -0.8
MDC1-202ENST00000416571 NR1D2Q14995 579 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 NKAIN2Q5VXU1 208 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 AFMIDQ63HM1 303 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 DENND2CQ68D51 928 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 ZNF438Q7Z4V0 828 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 HEATR4Q86WZ0 1026 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 PMEPA1Q969W9 287 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 ECHDC3Q96DC8 303 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 AHCYL2Q96HN2 611 aaKnown RBP10.03□□□□□ -0.8
MDC1-202ENST00000416571 MCEEQ96PE7 176 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 TEFMQ96QE5 360 aaKnown RBP10.03□□□□□ -0.8
MDC1-202ENST00000416571 EFHD1Q9BUP0 239 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 LRRC19Q9H756 370 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 GPN2Q9H9Y4 310 aaPredicted RBP10.03□□□□□ -0.8
MDC1-202ENST00000416571 NLRC4Q9NPP4 1024 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 B3GALT1Q9Y5Z6 326 aa10.03□□□□□ -0.8
MDC1-202ENST00000416571 NBPF19A0A087WUL8 3843 aa10.02□□□□□ -0.8
MDC1-202ENST00000416571 EFCAB7A8K855 629 aa10.02□□□□□ -0.81
MDC1-202ENST00000416571 DFFAO00273 331 aa10.02□□□□□ -0.81
MDC1-202ENST00000416571 EEF2KO00418 725 aaKnown RBP10.02□□□□□ -0.81
MDC1-202ENST00000416571 CEACAM5P06731 702 aa10.02□□□□□ -0.81
MDC1-202ENST00000416571 PRKAR1AP10644 381 aa10.02□□□□□ -0.81
MDC1-202ENST00000416571 THRAP10827 490 aa10.02□□□□□ -0.81
MDC1-202ENST00000416571 CHRNB2P17787 502 aa10.02□□□□□ -0.81
MDC1-202ENST00000416571 MPSTP25325 297 aa10.02□□□□□ -0.81
MDC1-202ENST00000416571 EEF1GP26641 437 aaKnown RBP10.02□□□□□ -0.81
MDC1-202ENST00000416571 ACTR1BP42025 376 aa10.02□□□□□ -0.81
MDC1-202ENST00000416571 RENBPP51606 427 aa10.02□□□□□ -0.81
MDC1-202ENST00000416571 ACTR1AP61163 376 aa10.02□□□□□ -0.81
MDC1-202ENST00000416571 AP1S1P61966 158 aa10.02□□□□□ -0.81
MDC1-202ENST00000416571 FOXK1P85037 733 aa10.02□□□□□ -0.81
MDC1-202ENST00000416571 NSUN2Q08J23 767 aaKnown RBP eCLIP10.02□□□□□ -0.81
MDC1-202ENST00000416571 PTP4A2Q12974 167 aa10.02□□□□□ -0.81
MDC1-202ENST00000416571 RFTN1Q14699 578 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms