RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 MMGT1Q8N4V1 131 aa20.56■□□□□ 0.88
PTPRU-203ENST00000415600 ATPAF2Q8N5M1 289 aa20.56■□□□□ 0.88
PTPRU-203ENST00000415600 NIPA2Q8N8Q9 360 aa20.56■□□□□ 0.88
PTPRU-203ENST00000415600 SPATA4Q8NEY3 305 aa20.56■□□□□ 0.88
PTPRU-203ENST00000415600 FGF11Q92914 225 aa20.56■□□□□ 0.88
PTPRU-203ENST00000415600 ANAPC7Q9UJX3 599 aa20.56■□□□□ 0.88
PTPRU-203ENST00000415600 ALG6Q9Y672 507 aa20.56■□□□□ 0.88
PTPRU-203ENST00000415600 MIF4GDA9UHW6 222 aaKnown RBP20.55■□□□□ 0.88
PTPRU-203ENST00000415600 MYO1FO00160 1098 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 CACNB4O00305 520 aaPredicted RBP20.55■□□□□ 0.88
PTPRU-203ENST00000415600 DDX3YO15523 660 aaKnown RBP20.55■□□□□ 0.88
PTPRU-203ENST00000415600 ITIH2P19823 946 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 C2orf54Q08AI8 447 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 KRT81Q14533 505 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 NFATC4Q14934 902 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 SMTNL2Q2TAL5 461 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 WSCD2Q2TBF2 565 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 RALGPS1Q5JS13 557 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 CYP4V2Q6ZWL3 525 aaPredicted RBP20.55■□□□□ 0.88
PTPRU-203ENST00000415600 EFL1Q7Z2Z2 1120 aaKnown RBP20.55■□□□□ 0.88
PTPRU-203ENST00000415600 LRRC49Q8IUZ0 686 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 HID1Q8IV36 788 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 NPWQ8N729 165 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 ACTRT1Q8TDG2 376 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 MS4A14Q96JA4 679 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 LRRC61Q9BV99 259 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 ARGLU1Q9NWB6 273 aaPredicted RBP20.55■□□□□ 0.88
PTPRU-203ENST00000415600 RCOR3Q9P2K3 495 aaPredicted RBP20.55■□□□□ 0.88
PTPRU-203ENST00000415600 LCMT1Q9UIC8 334 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 LAMA5O15230 3695 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 EME2A4GXA9 379 aaPredicted RBP20.55■□□□□ 0.88
PTPRU-203ENST00000415600 SOCS5O75159 536 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 KRT10P13645 584 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 SSR1P43307 286 aaKnown RBP20.55■□□□□ 0.88
PTPRU-203ENST00000415600 HK3P52790 923 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 CDH6P55285 790 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 INPP5AQ14642 412 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 TPRG1LQ5T0D9 272 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 C6orf132Q5T0Z8 1188 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 CDCP2Q5VXM1 449 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 ENPP7Q6UWV6 458 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 POLNQ7Z5Q5 900 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 GKN2Q86XP6 184 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 RBFAQ8N0V3 343 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 RASGEF1CQ8N431 466 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 ECHDC3Q96DC8 303 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 APOOQ9BUR5 198 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 BOCQ9BWV1 1114 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 PARD6BQ9BYG5 372 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 KLQ9UEF7 1012 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 COQ6Q9Y2Z9 468 aa20.55■□□□□ 0.88
PTPRU-203ENST00000415600 ADAMTS20P59510 1910 aa20.54■□□□□ 0.88
PTPRU-203ENST00000415600 BRINP1O60477 761 aa20.54■□□□□ 0.88
PTPRU-203ENST00000415600 TCEA3O75764 348 aa20.54■□□□□ 0.88
PTPRU-203ENST00000415600 PCCBP05166 539 aa20.54■□□□□ 0.88
PTPRU-203ENST00000415600 TUBBP07437 444 aa20.54■□□□□ 0.88
PTPRU-203ENST00000415600 TSHRP16473 764 aa20.54■□□□□ 0.88
PTPRU-203ENST00000415600 MESDQ14696 234 aa20.54■□□□□ 0.88
PTPRU-203ENST00000415600 SNIP1Q8TAD8 396 aaKnown RBP20.54■□□□□ 0.88
PTPRU-203ENST00000415600 WDR92Q96MX6 357 aa20.54■□□□□ 0.88
PTPRU-203ENST00000415600 CSPG4P5Q96PW8 444 aa20.54■□□□□ 0.88
PTPRU-203ENST00000415600 SMARCAL1Q9NZC9 954 aa20.54■□□□□ 0.88
PTPRU-203ENST00000415600 RAB21Q9UL25 225 aa20.54■□□□□ 0.88
PTPRU-203ENST00000415600 LY6G6EA0A0G2JKS1 128 aa20.53■□□□□ 0.88
PTPRU-203ENST00000415600 MUSKO15146 869 aa20.53■□□□□ 0.88
PTPRU-203ENST00000415600 CSO75390 466 aaKnown RBP20.53■□□□□ 0.88
PTPRU-203ENST00000415600 TNFP01375 233 aa20.53■□□□□ 0.88
PTPRU-203ENST00000415600 RHOXF2BP0C7M4 288 aa20.53■□□□□ 0.88
PTPRU-203ENST00000415600 RARAP10276 462 aa20.53■□□□□ 0.88
PTPRU-203ENST00000415600 COMTP21964 271 aa20.53■□□□□ 0.88
PTPRU-203ENST00000415600 IL1R2P27930 398 aa20.53■□□□□ 0.88
PTPRU-203ENST00000415600 RGRP47804 291 aa20.53■□□□□ 0.88
PTPRU-203ENST00000415600 TBC1D25Q3MII6 688 aa20.53■□□□□ 0.88
PTPRU-203ENST00000415600 RBM44Q6ZP01 1051 aaKnown RBP20.53■□□□□ 0.88
PTPRU-203ENST00000415600 DPPA4Q7L190 304 aa20.53■□□□□ 0.88
PTPRU-203ENST00000415600 NDUFAF2Q8N183 169 aa20.53■□□□□ 0.88
PTPRU-203ENST00000415600 OR6C4Q8NGE1 309 aa20.53■□□□□ 0.88
PTPRU-203ENST00000415600 ZNF578Q96N58 590 aaPredicted RBP20.53■□□□□ 0.88
PTPRU-203ENST00000415600 RHOXF2Q9BQY4 288 aa20.53■□□□□ 0.88
PTPRU-203ENST00000415600 CARD9Q9H257 536 aa20.53■□□□□ 0.88
PTPRU-203ENST00000415600 U3KQA8 63 aa20.53■□□□□ 0.88
PTPRU-203ENST00000415600 YY2O15391 372 aa20.52■□□□□ 0.88
PTPRU-203ENST00000415600 CEP104O60308 925 aa20.52■□□□□ 0.88
PTPRU-203ENST00000415600 USP12O75317 370 aa20.52■□□□□ 0.88
PTPRU-203ENST00000415600 GCATO75600 419 aa20.52■□□□□ 0.88
PTPRU-203ENST00000415600 AMPD1P23109 780 aa20.52■□□□□ 0.88
PTPRU-203ENST00000415600 CTNNA2P26232 953 aa20.52■□□□□ 0.88
PTPRU-203ENST00000415600 EIF2S3P41091 472 aaKnown RBP20.52■□□□□ 0.88
PTPRU-203ENST00000415600 SRP54P61011 504 aaKnown RBP20.52■□□□□ 0.88
PTPRU-203ENST00000415600 C1orf61Q13536 156 aa20.52■□□□□ 0.88
PTPRU-203ENST00000415600 MARC1Q5VT66 337 aa20.52■□□□□ 0.88
PTPRU-203ENST00000415600 GUSBP11Q6P575 273 aa20.52■□□□□ 0.88
PTPRU-203ENST00000415600 ARHGAP36Q6ZRI8 547 aa20.52■□□□□ 0.88
PTPRU-203ENST00000415600 RD3Q7Z3Z2 195 aa20.52■□□□□ 0.88
PTPRU-203ENST00000415600 ARL10Q8N8L6 244 aa20.52■□□□□ 0.88
PTPRU-203ENST00000415600 SPOCK2Q92563 424 aa20.52■□□□□ 0.88
PTPRU-203ENST00000415600 NUDCD1Q96RS6 583 aa20.52■□□□□ 0.88
PTPRU-203ENST00000415600 TTC7AQ9ULT0 858 aaPredicted RBP20.52■□□□□ 0.88
PTPRU-203ENST00000415600 PADI4Q9UM07 663 aa20.52■□□□□ 0.88
PTPRU-203ENST00000415600 OR1A2Q9Y585 309 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms