RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 FUNDC1Q8IVP5 155 aa13.33□□□□□ -0.28
CSTF2-203ENST00000415585 NUP93Q8N1F7 819 aa13.33□□□□□ -0.28
CSTF2-203ENST00000415585 OR52K2Q8NGK3 314 aa13.33□□□□□ -0.28
CSTF2-203ENST00000415585 NMD3Q96D46 503 aaKnown RBP13.33□□□□□ -0.28
CSTF2-203ENST00000415585 C19orf60Q96EN9 201 aa13.33□□□□□ -0.28
CSTF2-203ENST00000415585 ZFRQ96KR1 1074 aaKnown RBP13.33□□□□□ -0.28
CSTF2-203ENST00000415585 TBATAQ96M53 351 aa13.33□□□□□ -0.28
CSTF2-203ENST00000415585 PRPF18Q99633 342 aaKnown RBP13.33□□□□□ -0.28
CSTF2-203ENST00000415585 ERVK-6Q9BXR3 956 aa13.33□□□□□ -0.28
CSTF2-203ENST00000415585 COQ10BQ9H8M1 238 aa13.33□□□□□ -0.28
CSTF2-203ENST00000415585 POLR3BQ9NW08 1133 aaPredicted RBP13.33□□□□□ -0.28
CSTF2-203ENST00000415585 IGLV3-10A0A075B6K4 115 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 LOC285095A0A1B0GVY8 99 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 C7orf72A4D263 438 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 TMEM88BA6NKF7 163 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 CLGNO14967 610 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 VILLO15195 856 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 B4GALT3O60512 393 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 AOC2O75106 756 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 GJB3O75712 270 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 RTN3O95197 1032 aaPredicted RBP13.32□□□□□ -0.28
CSTF2-203ENST00000415585 ATP6V1B1P15313 513 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 CD1DP15813 335 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 ETFBP38117 255 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 ACADVLP49748 655 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 CDH13P55290 713 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 CREB5Q02930 508 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 TNK2Q07912 1038 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 APOFQ13790 326 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 SAMD4BQ5PRF9 694 aaKnown RBP13.32□□□□□ -0.28
CSTF2-203ENST00000415585 ZNF549Q6P9A3 640 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 CYP2R1Q6VVX0 501 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 HERC6Q8IVU3 1022 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 RIN3Q8TB24 985 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 SOCS4Q8WXH5 440 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 EXT2Q93063 718 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 IGSF8Q969P0 613 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 DUS3LQ96G46 650 aaKnown RBP13.32□□□□□ -0.28
CSTF2-203ENST00000415585 ZNF597Q96LX8 424 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 GRIP2Q9C0E4 1043 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 ZCWPW1Q9H0M4 648 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 GMIPQ9P107 970 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 ANKRD36A6QL64 1941 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 H0YJX3 145 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 TRPA1O75762 1119 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 SLC7A1P30825 629 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 SH3BGRP55822 239 aaPredicted RBP13.32□□□□□ -0.28
CSTF2-203ENST00000415585 USP46P62068 366 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 SH3BP2P78314 561 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 TIAL1Q01085 375 aaKnown RBP eCLIP13.32□□□□□ -0.28
CSTF2-203ENST00000415585 EFEMP1Q12805 493 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 FBXL22Q6P050 247 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 CHERPQ8IWX8 916 aaKnown RBP13.32□□□□□ -0.28
CSTF2-203ENST00000415585 CLYBLQ8N0X4 340 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 SLC39A3Q9BRY0 314 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 AKTIPQ9H8T0 292 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 HACD3Q9P035 362 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 DNAJC15Q9Y5T4 150 aa13.32□□□□□ -0.28
CSTF2-203ENST00000415585 TNPO2O14787 897 aaKnown RBP13.31□□□□□ -0.28
CSTF2-203ENST00000415585 GLP2RO95838 553 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 GOT2P00505 430 aaKnown RBP13.31□□□□□ -0.28
CSTF2-203ENST00000415585 SPATA31D3P0C874 917 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 PSMC3P17980 439 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 GPX3P22352 226 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 FGFR3P22607 806 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 GRK4P32298 578 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 SLC7A2P52569 658 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 STX1BP61266 288 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 ACVR1Q04771 509 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 IKBKEQ14164 716 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 PTPRCAPQ14761 206 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSTF2-203ENST00000415585 MTX3Q5HYI7 312 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 RAP1GAP2Q684P5 730 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 SPATA31D4Q6ZUB0 917 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 ZNF598Q86UK7 904 aaKnown RBP13.31□□□□□ -0.28
CSTF2-203ENST00000415585 RYBPQ8N488 228 aaPredicted RBP13.31□□□□□ -0.28
CSTF2-203ENST00000415585 PTGR2Q8N8N7 351 aaPredicted RBP13.31□□□□□ -0.28
CSTF2-203ENST00000415585 ATP6V0D2Q8N8Y2 350 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 DNAJC1Q96KC8 554 aaKnown RBP13.31□□□□□ -0.28
CSTF2-203ENST00000415585 UHRF1Q96T88 793 aaPredicted RBP13.31□□□□□ -0.28
CSTF2-203ENST00000415585 SEMA3CQ99985 751 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 RBM38Q9H0Z9 239 aaKnown RBP13.31□□□□□ -0.28
CSTF2-203ENST00000415585 FBXO44Q9H4M3 255 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSTF2-203ENST00000415585 GABRQQ9UN88 632 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 SNX13Q9Y5W8 968 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 ARL5AQ9Y689 179 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 GBF1Q92538 1859 aa13.31□□□□□ -0.28
CSTF2-203ENST00000415585 A0A1B0GVG6 124 aa13.3□□□□□ -0.28
CSTF2-203ENST00000415585 PPP6CO00743 305 aa13.3□□□□□ -0.28
CSTF2-203ENST00000415585 CD3EAPO15446 510 aaKnown RBP13.3□□□□□ -0.28
CSTF2-203ENST00000415585 CA12O43570 354 aa13.3□□□□□ -0.28
CSTF2-203ENST00000415585 CDK14O94921 469 aa13.3□□□□□ -0.28
CSTF2-203ENST00000415585 SIX3O95343 332 aaPredicted RBP13.3□□□□□ -0.28
CSTF2-203ENST00000415585 TBX18O95935 607 aa13.3□□□□□ -0.28
CSTF2-203ENST00000415585 RPLP2P05387 115 aaKnown RBP13.3□□□□□ -0.28
CSTF2-203ENST00000415585 IL10RBQ08334 325 aa13.3□□□□□ -0.28
CSTF2-203ENST00000415585 SREBF2Q12772 1141 aa13.3□□□□□ -0.28
CSTF2-203ENST00000415585 SEMA3AQ14563 771 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms