RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 PLEKHH3Q7Z736 793 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 METTL23Q86XA0 190 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 MINDY1Q8N5J2 469 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 RTL3Q8N8U3 475 aaKnown RBP9.81□□□□□ -0.84
CD44-206ENST00000415148 FAM47BQ8NA70 645 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 ADAMTS16Q8TE57 1224 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 SH3RF2Q8TEC5 729 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.81□□□□□ -0.84
CD44-206ENST00000415148 MYLPFQ96A32 169 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 RMND5BQ96G75 393 aaPredicted RBP9.81□□□□□ -0.84
CD44-206ENST00000415148 C1orf74Q96LT6 269 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 BIRC8Q96P09 236 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 TCF12Q99081 682 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 GPATCH1Q9BRR8 931 aaKnown RBP9.81□□□□□ -0.84
CD44-206ENST00000415148 GIMAP2Q9UG22 337 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 C17orf102A2RUQ5 167 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 ZNF701M0R085 212 aaPredicted RBP9.81□□□□□ -0.84
CD44-206ENST00000415148 CYP11A1P05108 521 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 HNRNPCP07910 306 aaKnown RBP eCLIP9.81□□□□□ -0.84
CD44-206ENST00000415148 ODC1P11926 461 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 HSD17B1P14061 328 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 CD247P20963 164 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 VARSP26640 1264 aaKnown RBP9.81□□□□□ -0.84
CD44-206ENST00000415148 RENBPP51606 427 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 NME5P56597 212 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 ATP6V0D1P61421 351 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 PRKCQQ04759 706 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 BNIP2Q12982 314 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 SEPT6Q14141 434 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 UGT3A2Q3SY77 523 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 KCTD21Q4G0X4 260 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 ZNF789Q5FWF6 425 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 COQ5Q5HYK3 327 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 CYHR1Q6ZMK1 362 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 USP50Q70EL3 339 aaPredicted RBP9.81□□□□□ -0.84
CD44-206ENST00000415148 ERMP1Q7Z2K6 904 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 CAMK1DQ8IU85 385 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 CILP2Q8IUL8 1156 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 EPHX4Q8IUS5 362 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 RBM12BQ8IXT5 1001 aaKnown RBP9.81□□□□□ -0.84
CD44-206ENST00000415148 FNDC8Q8TC99 324 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 CANT1Q8WVQ1 401 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 TFAP2CQ92754 450 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 IMP4Q96G21 291 aaKnown RBP9.81□□□□□ -0.84
CD44-206ENST00000415148 FCRL2Q96LA5 508 aaPredicted RBP9.81□□□□□ -0.84
CD44-206ENST00000415148 KATNAL1Q9BW62 490 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 NAA50Q9GZZ1 169 aaKnown RBP9.81□□□□□ -0.84
CD44-206ENST00000415148 MFSD1Q9H3U5 465 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 SMOC2Q9H3U7 446 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 ABCD2Q9UBJ2 740 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 CACNG4Q9UBN1 327 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 GIT1Q9Y2X7 761 aa9.81□□□□□ -0.84
CD44-206ENST00000415148 TIMM13Q9Y5L4 95 aaPredicted RBP9.81□□□□□ -0.84
CD44-206ENST00000415148 ATP6AP2A0A1C7CYW4 349 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 MROH6A6NGR9 719 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 UBFD1O14562 309 aaKnown RBP9.8□□□□□ -0.84
CD44-206ENST00000415148 ATP6AP2O75787 350 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 SEC24DO94855 1032 aaPredicted RBP9.8□□□□□ -0.84
CD44-206ENST00000415148 ATE1O95260 518 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 FUT4P22083 530 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 TPP2P29144 1249 aaPredicted RBP9.8□□□□□ -0.84
CD44-206ENST00000415148 HOXC8P31273 242 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 CPT1AP50416 773 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 HERVK_113P63132 956 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 TNK2Q07912 1038 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 MAPRE1Q15691 268 aaKnown RBP9.8□□□□□ -0.84
CD44-206ENST00000415148 UPP1Q16831 310 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 KDELC2Q7Z4H8 507 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 ANKRD23Q86SG2 305 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 ISCA2Q86U28 154 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 RNF135Q8IUD6 432 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 CLVS1Q8IUQ0 354 aaPredicted RBP9.8□□□□□ -0.84
CD44-206ENST00000415148 FUNDC1Q8IVP5 155 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 NPLOC4Q8TAT6 608 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 TSPEARQ8WU66 669 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 PPP1R14BQ96C90 147 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 C19orf60Q96EN9 201 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 FEM1CQ96JP0 617 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 RTP3Q9BQQ7 232 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 ERVK-6Q9BXR3 956 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 MUC13Q9H3R2 512 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 SOX17Q9H6I2 414 aaPredicted RBP9.8□□□□□ -0.84
CD44-206ENST00000415148 IL1RL2Q9HB29 575 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 POPDC3Q9HBV1 291 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 FAM105AQ9NUU6 356 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 DSEQ9UL01 958 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 CLEC11AQ9Y240 323 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 PTGDR2Q9Y5Y4 395 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 TPST1O60507 370 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 VPS4BO75351 444 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 MATN4O95460 622 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 S1PR4O95977 384 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 IL10P22301 178 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 BDNFP23560 247 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 SOX11P35716 441 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 CHRNA4P43681 627 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 MAPK10P53779 464 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 FOXM1Q08050 763 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 INPP5AQ14642 412 aa9.8□□□□□ -0.84
CD44-206ENST00000415148 C16orf72Q14CZ0 275 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms