RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 DYRK4Q9NR20 520 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 CHRAC1Q9NRG0 131 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 NLE1Q9NVX2 485 aaPredicted RBP13.3□□□□□ -0.28
CNN3-203ENST00000415017 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.3□□□□□ -0.28
CNN3-203ENST00000415017 GGT7Q9UJ14 662 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 FAM169AQ9Y6X4 670 aa13.3□□□□□ -0.28
CNN3-203ENST00000415017 TNRC6BQ9UPQ9 1833 aaKnown RBP13.29□□□□□ -0.28
CNN3-203ENST00000415017 A0A0U1RQS6 177 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 RGSL1A5PLK6 1076 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 GAPDHSO14556 408 aaPredicted RBP13.29□□□□□ -0.28
CNN3-203ENST00000415017 RNASEH2AO75792 299 aaKnown RBP13.29□□□□□ -0.28
CNN3-203ENST00000415017 USP1O94782 785 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 CLDN7O95471 211 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 TTC4O95801 387 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 GSTA2P09210 222 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 C1SP09871 688 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 H2AFXP16104 143 aaPredicted RBP13.29□□□□□ -0.28
CNN3-203ENST00000415017 PGAM1P18669 254 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 LPOP22079 712 aaPredicted RBP13.29□□□□□ -0.28
CNN3-203ENST00000415017 ARNTP27540 789 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 ARCN1P48444 511 aaKnown RBP13.29□□□□□ -0.28
CNN3-203ENST00000415017 PTPN5P54829 565 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 ADPRHP54922 357 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 GPX6P59796 221 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 MTM1Q13496 603 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 MAP7D1Q3KQU3 841 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 ANKRD20A4Q4UJ75 823 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 LRRC73Q5JTD7 316 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 SPDYCQ5MJ68 293 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 CFAP58Q5T655 872 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 LRRC66Q68CR7 880 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 ERAP2Q6P179 960 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.29□□□□□ -0.28
CNN3-203ENST00000415017 CYP2U1Q7Z449 544 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 FBXO36Q8NEA4 188 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 BLOC1S5Q8TDH9 187 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 STYXQ8WUJ0 223 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 HMGB4Q8WW32 186 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 ASB12Q8WXK4 309 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 PBXIP1Q96AQ6 731 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 STAMBPL1Q96FJ0 436 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 FCRL3Q96P31 734 aaPredicted RBP13.29□□□□□ -0.28
CNN3-203ENST00000415017 HHIPQ96QV1 700 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 OMDQ99983 421 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 C1QTNF2Q9BXJ5 285 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 SGK2Q9HBY8 427 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 LRRC4CQ9HCJ2 640 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 PREBQ9HCU5 417 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 SAYSD1Q9NPB0 183 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 CD93Q9NPY3 652 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 WSB2Q9NYS7 404 aaPredicted RBP13.29□□□□□ -0.28
CNN3-203ENST00000415017 MOCS1Q9NZB8 636 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 NINJ2Q9NZG7 142 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 KCTD3Q9Y597 815 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 ARL5AQ9Y689 179 aa13.29□□□□□ -0.28
CNN3-203ENST00000415017 C2orf81A6NN90 581 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 AGAP14A8MT82 685 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 TNFRSF10AO00220 468 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 ZNF217O75362 1048 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 POLBP06746 335 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 NMBRP28336 390 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 OXTRP30559 389 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 LIG3P49916 1009 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 DCDC1P59894 354 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 FAM193AP78312 1265 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 XIAPP98170 497 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 KIAA0930Q6ICG6 404 aaPredicted RBP13.28□□□□□ -0.28
CNN3-203ENST00000415017 ANO7Q6IWH7 933 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 ZNF449Q6P9G9 518 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 UNC5AQ6ZN44 842 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 TRMT10CQ7L0Y3 403 aaKnown RBP13.28□□□□□ -0.28
CNN3-203ENST00000415017 GLT6D1Q7Z4J2 308 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 ZBED8Q8IZ13 594 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 PPHLN1Q8NEY8 458 aaKnown RBP13.28□□□□□ -0.28
CNN3-203ENST00000415017 OR13C4Q8NGS5 318 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 MFSD3Q96ES6 412 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 TRIM56Q9BRZ2 755 aaKnown RBP13.28□□□□□ -0.28
CNN3-203ENST00000415017 CDC42EP4Q9H3Q1 356 aaKnown RBP13.28□□□□□ -0.28
CNN3-203ENST00000415017 SEMA4AQ9H3S1 761 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 ZFR2Q9UPR6 939 aaKnown RBP13.28□□□□□ -0.28
CNN3-203ENST00000415017 ITM2BQ9Y287 266 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 NCKAP1Q9Y2A7 1128 aa13.28□□□□□ -0.28
CNN3-203ENST00000415017 IGHV1OR15-9A0A0B4J2B8 117 aa13.27□□□□□ -0.29
CNN3-203ENST00000415017 C1orf232A0A0U1RR37 186 aa13.27□□□□□ -0.29
CNN3-203ENST00000415017 LATO43561 262 aa13.27□□□□□ -0.29
CNN3-203ENST00000415017 ACADMP11310 421 aa13.27□□□□□ -0.29
CNN3-203ENST00000415017 XPAP23025 273 aaPredicted RBP13.27□□□□□ -0.29
CNN3-203ENST00000415017 ACSL1P33121 698 aa13.27□□□□□ -0.29
CNN3-203ENST00000415017 SPINT3P49223 89 aa13.27□□□□□ -0.29
CNN3-203ENST00000415017 ARSDP51689 593 aa13.27□□□□□ -0.29
CNN3-203ENST00000415017 SEMG2Q02383 582 aa13.27□□□□□ -0.29
CNN3-203ENST00000415017 DPTQ07507 201 aa13.27□□□□□ -0.29
CNN3-203ENST00000415017 CRYMQ14894 314 aa13.27□□□□□ -0.29
CNN3-203ENST00000415017 UAP1Q16222 522 aaPredicted RBP13.27□□□□□ -0.29
CNN3-203ENST00000415017 KYNUQ16719 465 aa13.27□□□□□ -0.29
CNN3-203ENST00000415017 SKIDA1Q1XH10 827 aa13.27□□□□□ -0.29
CNN3-203ENST00000415017 SPANXN3Q5MJ09 141 aa13.27□□□□□ -0.29
CNN3-203ENST00000415017 BEND6Q5SZJ8 279 aaPredicted RBP13.27□□□□□ -0.29
CNN3-203ENST00000415017 UBAP2Q5T6F2 1119 aaKnown RBP13.27□□□□□ -0.29
CNN3-203ENST00000415017 KIAA1161Q6NSJ0 714 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms