RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 WNT11O96014 354 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 TKTP29401 623 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 CLCN5P51795 746 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 NME5P56597 212 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 HMGN5P82970 282 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 CCL15Q16663 113 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 MTHFSDQ2M296 383 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 ALG11Q2TAA5 492 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 DCAF17Q5H9S7 520 aaPredicted RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 MOB2Q70IA6 237 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 TLK2Q86UE8 772 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 SGMS1Q86VZ5 419 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 NLRP14Q86W24 1093 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 GAS2L3Q86XJ1 694 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 ERO1BQ86YB8 467 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 TICAM1Q8IUC6 712 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 TUSC5Q8IXB3 177 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 POGLUT1Q8NBL1 392 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 RAET1EQ8TD07 263 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 TRMT61AQ96FX7 289 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 FAM227BQ96M60 508 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 ADAD1Q96M93 576 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 AGAP3Q96P47 875 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 GPR78Q96P69 363 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 LMF1Q96S06 567 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 INTS14Q96SY0 518 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 MRIQ9BWK5 157 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 PLA2G12BQ9BX93 195 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 VN1R3Q9BXE9 311 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 COA1Q9GZY4 146 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 FAM83DQ9H4H8 585 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 MVB12BQ9H7P6 319 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 C20orf141Q9NUB4 165 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 BEX4Q9NWD9 120 aaPredicted RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 NTMQ9P121 344 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 PLEKHB1Q9UF11 243 aaPredicted RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 B3GNT3Q9Y2A9 372 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 KCNK7Q9Y2U2 307 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 LYVE1Q9Y5Y7 322 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 COPG1Q9Y678 874 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 NFS1Q9Y697 457 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 KIAA0100Q14667 2235 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 LOC105369274A0A096LPK9 316 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 LOC102723532A0A0G2JNH3 316 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 FRMD3A2A2Y4 597 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 NPIPB13A6NJU9 1138 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 NPIPB5A8MRT5 1133 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 NPIPB4C9JG80 1138 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 SMIM22K7EJ46 135 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 EIF2S1P05198 315 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 EBLN1P0CF75 366 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 CYP2D6P10635 497 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 KIF5BP33176 963 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 HNF1BP35680 557 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 STAT2P52630 851 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 SLC37A1P57057 533 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 ADAM8P78325 824 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 TRA2AQ13595 282 aaKnown RBP eCLIP2.63□□□□□ -1.99
MCF2-204ENST00000414978 KPNB1Q14974 876 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 ZMAT1Q5H9K5 638 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 PET117Q6UWS5 81 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 DLK2Q6UY11 383 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 Q6ZUG5 572 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 THNSL1Q8IYQ7 743 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 MAML2Q8IZL2 1156 aaPredicted RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 OR4N4Q8N0Y3 316 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 OPTNQ96CV9 577 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 PTCD3Q96EY7 689 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 STAMBPL1Q96FJ0 436 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 ZC3HAV1LQ96H79 300 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 FAR2Q96K12 515 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 CD180Q99467 661 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 GPR88Q9GZN0 384 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 CYP39A1Q9NYL5 469 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 ZNFX1Q9P2E3 1918 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 NAV1Q8NEY1 1877 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 ZNF318Q5VUA4 2279 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 KAT6AQ92794 2004 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 A0A0B4J293 547 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 SYCE3A1L190 88 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 KRT87PA6NCN2 255 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 A6NL46 340 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 CDRT15L2A8MXV6 281 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 DNM1LO00429 736 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 CXCL11O14625 94 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 STRNO43815 780 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 HBP1O60381 514 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 TPOP07202 933 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 IL6RP08887 468 aaPredicted RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 MYBL1P10243 752 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 ADRA1BP35368 520 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 SLC16A2P36021 539 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 IGHMBP2P38935 993 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 ARSFP54793 590 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 OLR1P78380 273 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 OCA2Q04671 838 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 MRPL49Q13405 166 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 TNFAIP1Q13829 316 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 BMT2Q1RMZ1 405 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 CFAP221Q4G0U5 840 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms