RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 PLXNA2O75051 1894 aa5□□□□□ -1.61
VPS41-205ENST00000414632 ABCA7Q8IZY2 2146 aa5□□□□□ -1.61
VPS41-205ENST00000414632 CHD5Q8TDI0 1954 aa5□□□□□ -1.61
VPS41-205ENST00000414632 TYW5A2RUC4 315 aaKnown RBP5□□□□□ -1.61
VPS41-205ENST00000414632 FITM1A5D6W6 292 aa5□□□□□ -1.61
VPS41-205ENST00000414632 PRR23AA6NEV1 266 aa5□□□□□ -1.61
VPS41-205ENST00000414632 C2CD4BA6NLJ0 364 aa5□□□□□ -1.61
VPS41-205ENST00000414632 H0Y626 953 aa5□□□□□ -1.61
VPS41-205ENST00000414632 IFRD1O00458 451 aaPredicted RBP5□□□□□ -1.61
VPS41-205ENST00000414632 PSPNO60542 156 aa5□□□□□ -1.61
VPS41-205ENST00000414632 SRGAP2O75044 1071 aa5□□□□□ -1.61
VPS41-205ENST00000414632 CNTN5O94779 1100 aa5□□□□□ -1.61
VPS41-205ENST00000414632 LUC7L3O95232 432 aaKnown RBP5□□□□□ -1.61
VPS41-205ENST00000414632 APBB3O95704 486 aa5□□□□□ -1.61
VPS41-205ENST00000414632 LATS1O95835 1130 aa5□□□□□ -1.61
VPS41-205ENST00000414632 FTLP02792 175 aaPredicted RBP5□□□□□ -1.61
VPS41-205ENST00000414632 CALB1P05937 261 aa5□□□□□ -1.61
VPS41-205ENST00000414632 TPM3P06753 285 aa5□□□□□ -1.61
VPS41-205ENST00000414632 CCDC172P0C7W6 258 aa5□□□□□ -1.61
VPS41-205ENST00000414632 KRT3P12035 628 aa5□□□□□ -1.61
VPS41-205ENST00000414632 PDGFRAP16234 1089 aa5□□□□□ -1.61
VPS41-205ENST00000414632 PRKCHP24723 683 aa5□□□□□ -1.61
VPS41-205ENST00000414632 NTSR1P30989 418 aa5□□□□□ -1.61
VPS41-205ENST00000414632 SDC4P31431 198 aa5□□□□□ -1.61
VPS41-205ENST00000414632 CSKP41240 450 aa5□□□□□ -1.61
VPS41-205ENST00000414632 NBL1P41271 181 aa5□□□□□ -1.61
VPS41-205ENST00000414632 PRKCIP41743 596 aa5□□□□□ -1.61
VPS41-205ENST00000414632 CXCR3P49682 368 aa5□□□□□ -1.61
VPS41-205ENST00000414632 MRE11P49959 708 aa5□□□□□ -1.61
VPS41-205ENST00000414632 DGKEP52429 567 aa5□□□□□ -1.61
VPS41-205ENST00000414632 LGALS4P56470 323 aa5□□□□□ -1.61
VPS41-205ENST00000414632 MRPS21P82921 87 aaKnown RBP5□□□□□ -1.61
VPS41-205ENST00000414632 ZBED6P86452 979 aa5□□□□□ -1.61
VPS41-205ENST00000414632 OGDHQ02218 1023 aa5□□□□□ -1.61
VPS41-205ENST00000414632 LMAN2Q12907 356 aa5□□□□□ -1.61
VPS41-205ENST00000414632 EIF4EBP2Q13542 120 aaPredicted RBP5□□□□□ -1.61
VPS41-205ENST00000414632 CDH18Q13634 790 aa5□□□□□ -1.61
VPS41-205ENST00000414632 ZNF234Q14588 700 aa5□□□□□ -1.61
VPS41-205ENST00000414632 LLGL1Q15334 1064 aa5□□□□□ -1.61
VPS41-205ENST00000414632 CCDC6Q16204 474 aa5□□□□□ -1.61
VPS41-205ENST00000414632 MUM1Q2TAK8 710 aa5□□□□□ -1.61
VPS41-205ENST00000414632 UAP1L1Q3KQV9 507 aa5□□□□□ -1.61
VPS41-205ENST00000414632 SLC25A52Q3SY17 297 aa5□□□□□ -1.61
VPS41-205ENST00000414632 FUT11Q495W5 492 aa5□□□□□ -1.61
VPS41-205ENST00000414632 CCDC14Q49A88 953 aa5□□□□□ -1.61
VPS41-205ENST00000414632 FBXO43Q4G163 708 aa5□□□□□ -1.61
VPS41-205ENST00000414632 ALFQ53S48 1182 aa5□□□□□ -1.61
VPS41-205ENST00000414632 ACAD10Q6JQN1 1059 aa5□□□□□ -1.61
VPS41-205ENST00000414632 FBXL22Q6P050 247 aa5□□□□□ -1.61
VPS41-205ENST00000414632 SCYL2Q6P3W7 929 aa5□□□□□ -1.61
VPS41-205ENST00000414632 DCUN1D2Q6PH85 259 aa5□□□□□ -1.61
VPS41-205ENST00000414632 WDR59Q6PJI9 974 aa5□□□□□ -1.61
VPS41-205ENST00000414632 UNQ6494/PRO21346Q6UXR6 183 aa5□□□□□ -1.61
VPS41-205ENST00000414632 BEND5Q7L4P6 421 aa5□□□□□ -1.61
VPS41-205ENST00000414632 SYT13Q7L8C5 426 aa5□□□□□ -1.61
VPS41-205ENST00000414632 TFAP2DQ7Z6R9 452 aa5□□□□□ -1.61
VPS41-205ENST00000414632 LONP2Q86WA8 852 aa5□□□□□ -1.61
VPS41-205ENST00000414632 GAS2L3Q86XJ1 694 aa5□□□□□ -1.61
VPS41-205ENST00000414632 PHF13Q86YI8 300 aaPredicted RBP5□□□□□ -1.61
VPS41-205ENST00000414632 LYSMD2Q8IV50 215 aa5□□□□□ -1.61
VPS41-205ENST00000414632 VSTM4Q8IW00 320 aa5□□□□□ -1.61
VPS41-205ENST00000414632 MCOLN2Q8IZK6 566 aa5□□□□□ -1.61
VPS41-205ENST00000414632 APCDD1Q8J025 514 aa5□□□□□ -1.61
VPS41-205ENST00000414632 CCAR2Q8N163 923 aaKnown RBP5□□□□□ -1.61
VPS41-205ENST00000414632 DCLK2Q8N568 766 aa5□□□□□ -1.61
VPS41-205ENST00000414632 C3orf20Q8ND61 904 aa5□□□□□ -1.61
VPS41-205ENST00000414632 MDGA1Q8NFP4 955 aa5□□□□□ -1.61
VPS41-205ENST00000414632 OR52K2Q8NGK3 314 aa5□□□□□ -1.61
VPS41-205ENST00000414632 FAM172AQ8WUF8 416 aa5□□□□□ -1.61
VPS41-205ENST00000414632 ATRIPQ8WXE1 791 aa5□□□□□ -1.61
VPS41-205ENST00000414632 RLN3Q8WXF3 142 aa5□□□□□ -1.61
VPS41-205ENST00000414632 NKD2Q969F2 451 aaPredicted RBP5□□□□□ -1.61
VPS41-205ENST00000414632 ZNF653Q96CK0 615 aa5□□□□□ -1.61
VPS41-205ENST00000414632 PEX11GQ96HA9 241 aa5□□□□□ -1.61
VPS41-205ENST00000414632 BTN2A3PQ96KV6 586 aa5□□□□□ -1.61
VPS41-205ENST00000414632 RPRD1AQ96P16 312 aaPredicted RBP5□□□□□ -1.61
VPS41-205ENST00000414632 DDX50Q9BQ39 737 aaKnown RBP5□□□□□ -1.61
VPS41-205ENST00000414632 NUP58Q9BVL2 599 aa5□□□□□ -1.61
VPS41-205ENST00000414632 TRIM7Q9C029 511 aa5□□□□□ -1.61
VPS41-205ENST00000414632 TRIM5Q9C035 493 aa5□□□□□ -1.61
VPS41-205ENST00000414632 WDCPQ9H6R7 721 aa5□□□□□ -1.61
VPS41-205ENST00000414632 PRDM7Q9NQW5 492 aa5□□□□□ -1.61
VPS41-205ENST00000414632 GPATCH2LQ9NWQ4 482 aa5□□□□□ -1.61
VPS41-205ENST00000414632 ZSCAN32Q9NX65 697 aa5□□□□□ -1.61
VPS41-205ENST00000414632 AIPL1Q9NZN9 384 aa5□□□□□ -1.61
VPS41-205ENST00000414632 MPP6Q9NZW5 540 aa5□□□□□ -1.61
VPS41-205ENST00000414632 CNOT8Q9UFF9 292 aaKnown RBP5□□□□□ -1.61
VPS41-205ENST00000414632 SLC12A6Q9UHW9 1150 aa5□□□□□ -1.61
VPS41-205ENST00000414632 TAGLN3Q9UI15 199 aa5□□□□□ -1.61
VPS41-205ENST00000414632 GGA2Q9UJY4 613 aa5□□□□□ -1.61
VPS41-205ENST00000414632 STOML2Q9UJZ1 356 aa5□□□□□ -1.61
VPS41-205ENST00000414632 FBXO10Q9UK96 956 aa5□□□□□ -1.61
VPS41-205ENST00000414632 TMPRSS11EQ9UL52 423 aa5□□□□□ -1.61
VPS41-205ENST00000414632 MYO6Q9UM54 1294 aa5□□□□□ -1.61
VPS41-205ENST00000414632 CAPN11Q9UMQ6 739 aa5□□□□□ -1.61
VPS41-205ENST00000414632 SMG5Q9UPR3 1016 aaKnown RBP5□□□□□ -1.61
VPS41-205ENST00000414632 ASB1Q9Y576 335 aa5□□□□□ -1.61
VPS41-205ENST00000414632 STON1Q9Y6Q2 735 aa5□□□□□ -1.61
VPS41-205ENST00000414632 DOCK9Q9BZ29 2069 aa5□□□□□ -1.61
VPS41-205ENST00000414632 ITIH6Q6UXX5 1313 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms