RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 PTAR1Q7Z6K3 402 aaPredicted RBP6.4□□□□□ -1.38
USP54-202ENST00000413442 TECPR1Q7Z6L1 1165 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 GAS2L3Q86XJ1 694 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 PGBD5Q8N414 524 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 EID2Q8N6I1 236 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 OR56A4Q8NGH8 313 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 ARRDC2Q8TBH0 407 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 BRSK1Q8TDC3 778 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 MAIP1Q8WWC4 291 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 ANP32BQ92688 251 aaKnown RBP6.4□□□□□ -1.38
USP54-202ENST00000413442 KLK6Q92876 244 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 RNF25Q96BH1 459 aaPredicted RBP6.4□□□□□ -1.38
USP54-202ENST00000413442 TADA1Q96BN2 335 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 DTD2Q96FN9 168 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 IMP4Q96G21 291 aaKnown RBP6.4□□□□□ -1.38
USP54-202ENST00000413442 EXOC2Q96KP1 924 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 FCRL5Q96RD9 977 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 RBM15Q96T37 977 aaKnown RBP eCLIP6.4□□□□□ -1.38
USP54-202ENST00000413442 DPYSL5Q9BPU6 564 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 SCNM1Q9BWG6 230 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 BOCQ9BWV1 1114 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 TDRD1Q9BXT4 1180 aaKnown RBP6.4□□□□□ -1.38
USP54-202ENST00000413442 FSCN3Q9NQT6 498 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 HOMER3Q9NSC5 361 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 DNAJC28Q9NX36 388 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 GOLGA6AQ9NYA3 693 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 PKD2L2Q9NZM6 624 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 VPS18Q9P253 973 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 DOLKQ9UPQ8 538 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 PTPRBP23467 1997 aa6.4□□□□□ -1.39
USP54-202ENST00000413442 hCG_1818297A0A087WSY0 165 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 SPAARA0A1B0GVQ0 90 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 LOC285095A0A1B0GVY8 99 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 CAPN8A6NHC0 703 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 OR5K4A6NMS3 321 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 K7ESM1 405 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 AP3B1O00203 1094 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 RNF103O00237 685 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 KCNK3O14649 394 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 GIPC1O14908 333 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 RAD51BO15315 384 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 SPINT1O43278 529 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 NDST3O95803 873 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 IVLP07476 585 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 ATXN1LP0C7T5 689 aaKnown RBP6.39□□□□□ -1.39
USP54-202ENST00000413442 SLC2A4P14672 509 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 JUPP14923 745 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 HLA-DPA1P20036 260 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 MSNP26038 577 aaKnown RBP6.39□□□□□ -1.39
USP54-202ENST00000413442 IGFALSP35858 605 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 HMGCLP35914 325 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 GEMP55040 296 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 CLDN2P57739 230 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 DCDC1P59894 354 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 DAB2P98082 770 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 PTSQ03393 145 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 TRAF2Q12933 501 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 FOXC1Q12948 553 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 RALGDSQ12967 914 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 PRKD1Q15139 912 aaPredicted RBP6.39□□□□□ -1.39
USP54-202ENST00000413442 IRF4Q15306 451 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 C6orf132Q5T0Z8 1188 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 CCDC181Q5TID7 509 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 ARMC3Q5W041 872 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 OGFOD3Q6PK18 319 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 IGF2-ASQ6U949 168 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 CRTC1Q6UUV9 634 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 ENPP7Q6UWV6 458 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 ADAMTSL4Q6UY14 1074 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 PEX26Q7Z412 305 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 TMC3Q7Z5M5 1100 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 SLCO6A1Q86UG4 719 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 CCDC50Q8IVM0 306 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 CDKL3Q8IVW4 592 aaPredicted RBP6.39□□□□□ -1.39
USP54-202ENST00000413442 PHACTR4Q8IZ21 702 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 SLC22A18ASQ8N1D0 253 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 CNTD1Q8N815 330 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 LRRC57Q8N9N7 239 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 ZNF548Q8NEK5 533 aaPredicted RBP6.39□□□□□ -1.39
USP54-202ENST00000413442 OR2I1PQ8NGU4 316 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 PDCD6IPQ8WUM4 868 aaKnown RBP6.39□□□□□ -1.39
USP54-202ENST00000413442 HTR3CQ8WXA8 447 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 TMEM159Q96B96 161 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 AP2M1Q96CW1 435 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 NUS1Q96E22 293 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 SCARF2Q96GP6 870 aaPredicted RBP6.39□□□□□ -1.39
USP54-202ENST00000413442 CAMK1GQ96NX5 476 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 PLEKHG4BQ96PX9 1271 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 LGMNQ99538 433 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 ZSCAN5AQ9BUG6 496 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 WRAP53Q9BUR4 548 aaKnown RBP6.39□□□□□ -1.39
USP54-202ENST00000413442 GSDMCQ9BYG8 508 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 OSBPL8Q9BZF1 889 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 B3GNT4Q9C0J1 378 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 ABCG4Q9H172 646 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 FAM83DQ9H4H8 585 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 WDR26Q9H7D7 661 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 ZFYVE1Q9HBF4 777 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 GLOD4Q9HC38 313 aa6.39□□□□□ -1.39
USP54-202ENST00000413442 TOR4AQ9NXH8 423 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms