RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 KYNUQ16719 465 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 MMEL1Q495T6 779 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 ERMARDQ5T6L9 678 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 C1QTNF12Q5T7M4 302 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 TRILQ7L0X0 811 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 LINGO2Q7L985 606 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 PTF1AQ7RTS3 328 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 ANKRD13BQ86YJ7 626 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 SFTPA2Q8IWL1 248 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 MCUQ8NE86 351 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 GPT2Q8TD30 523 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 SLC35F5Q8WV83 523 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 UBE2Q2Q8WVN8 375 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 DPF1Q92782 380 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 ERGIC1Q969X5 290 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 MOAP1Q96BY2 351 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 PGAP3Q96FM1 320 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 PPP1R13BQ96KQ4 1090 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 AGAP2Q99490 1192 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 KIFC3Q9BVG8 833 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 C1QTNF1Q9BXJ1 281 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 R3HDMLQ9H3Y0 253 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 KLHL31Q9H511 634 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 MAP6D1Q9H9H5 199 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 ADARB2Q9NS39 739 aaKnown RBP4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 PAG1Q9NWQ8 432 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 WSB2Q9NYS7 404 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 NFE2L3Q9Y4A8 694 aa4.87□□□□□ -1.63
HMGB3P31-201ENST00000413333 A0A0G2JK05 382 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 A6NL46 340 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 PRRG2O14669 202 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 TLR2O60603 784 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 JRKO75564 520 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 PSMD10O75832 226 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 FSHBP01225 129 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 HIST1H2ABP04908 130 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 CYC1P08574 325 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 ACTN1P12814 892 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 MMP9P14780 707 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 HIST1H2ADP20671 130 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 PIGAP37287 484 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 BUD31P41223 144 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 PRCPP42785 496 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 PNLIPRP2P54317 469 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 TAS2R40P59535 323 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 ZBED6P86452 979 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 ZXDAP98168 799 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 COL10A1Q03692 680 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 NEDD9Q14511 834 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 DAZAP2Q15038 168 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 INPP5JQ15735 1006 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 C15orf59Q2T9L4 293 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 SUPT20HL1Q3ZLR7 823 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 C9orf152Q5JTZ5 239 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 ASPHD1Q5U4P2 390 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 SLC18B1Q6NT16 456 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 PCSK4Q6UW60 755 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 SLC16A12Q6ZSM3 486 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 HIST3H2AQ7L7L0 130 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 PLPPR4Q7Z2D5 763 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 RD3Q7Z3Z2 195 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 YTHDF3Q7Z739 585 aaKnown RBP4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 SCYL3Q8IZE3 742 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 SCCPDHQ8NBX0 429 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 ARRDC2Q8TBH0 407 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 DDB2Q92466 427 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 ATP6V1E2Q96A05 226 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 TMCO6Q96DC7 493 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 FIZ1Q96SL8 496 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 WDR77Q9BQA1 342 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 MSTO1Q9BUK6 570 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 CCDC106Q9BWC9 280 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 RCOR1Q9UKL0 485 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 PLAGL1Q9UM63 463 aa4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 TTBK1Q5TCY1 1321 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P31-201ENST00000413333 KDM4EB2RXH2 506 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 ZNF814B7Z6K7 855 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 ATP2A1O14983 1001 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 DIAPH2O60879 1101 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 ZC3H11AO75152 810 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 TBX10O75333 385 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 NDUFB4O95168 129 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 RPN1P04843 607 aaKnown RBP4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 TRIM21P19474 475 aaKnown RBP4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 MYF6P23409 242 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 TBXAS1P24557 533 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 CHATP28329 748 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 EEF1DP29692 281 aaKnown RBP4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 COPB2P35606 906 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 ACVRL1P37023 503 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 TMF1P82094 1093 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 ECT2LQ008S8 904 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 GRSF1Q12849 480 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 LAMB3Q13751 1172 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 DLG2Q15700 870 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 SOWAHCQ53LP3 525 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 DCAF6Q58WW2 860 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 SIGIRRQ6IA17 410 aa4.85□□□□□ -1.63
HMGB3P31-201ENST00000413333 SLC2A7Q6PXP3 512 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms