RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 PITRM1Q5JRX3 1037 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 STXBP5Q5T5C0 1151 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 C14orf80Q86SX3 495 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 PRPF39Q86UA1 669 aaKnown RBP8.54□□□□□ -1.04
SYNE1-211ENST00000413186 GATAD2AQ86YP4 633 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 SPATA22Q8NHS9 363 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 RIC8BQ9NVN3 520 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 NCKIPSDQ9NZQ3 722 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 TMA7Q9Y2S6 64 aaKnown RBP8.54□□□□□ -1.04
SYNE1-211ENST00000413186 TCAF1Q9Y4C2 921 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 MAN2B1O00754 1011 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 BUD23O43709 281 aaKnown RBP8.54□□□□□ -1.04
SYNE1-211ENST00000413186 PYGBP11216 843 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 CPA3P15088 417 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 FMO4P31512 558 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 ACVRL1P37023 503 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 ATXN3P54252 364 aaPredicted RBP8.54□□□□□ -1.04
SYNE1-211ENST00000413186 SLC10A7Q0GE19 358 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 BOP1Q14137 746 aaKnown RBP8.54□□□□□ -1.04
SYNE1-211ENST00000413186 MRPL58Q14197 206 aaKnown RBP8.54□□□□□ -1.04
SYNE1-211ENST00000413186 CERCAMQ5T4B2 595 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 RHBDF2Q6PJF5 856 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 ST13P4Q8IZP2 240 aaPredicted RBP8.54□□□□□ -1.04
SYNE1-211ENST00000413186 ZNF398Q8TD17 642 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 SGF29Q96ES7 293 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 MYRFLQ96LU7 910 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 TCF12Q99081 682 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 SMG9Q9H0W8 520 aaKnown RBP8.54□□□□□ -1.04
SYNE1-211ENST00000413186 CDH19Q9H159 772 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 TUBB1Q9H4B7 451 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 FAM83DQ9H4H8 585 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 C8orf33Q9H7E9 229 aaPredicted RBP8.54□□□□□ -1.04
SYNE1-211ENST00000413186 EVA1BQ9NVM1 165 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 BAG5Q9UL15 447 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 TMCO1Q9UM00 188 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 SLCO1B7G3V0H7 640 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 NPC1O15118 1278 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 NVLO15381 856 aaKnown RBP8.54□□□□□ -1.04
SYNE1-211ENST00000413186 USP1O94782 785 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 CTSEP14091 401 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 ATF4P18848 351 aaPredicted RBP8.54□□□□□ -1.04
SYNE1-211ENST00000413186 MC4RP32245 332 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 BTN3A2P78410 334 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 NRG1Q02297 640 aaPredicted RBP8.54□□□□□ -1.04
SYNE1-211ENST00000413186 CAMK2GQ13555 558 aaPredicted RBP8.54□□□□□ -1.04
SYNE1-211ENST00000413186 PTPRNQ16849 979 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 GDPD4Q6W3E5 623 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 SIX5Q8N196 739 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 OR4K2Q8NGD2 314 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 CMTM5Q96DZ9 223 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 LRIG1Q96JA1 1093 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 KLHL32Q96NJ5 620 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 ILKAPQ9H0C8 392 aaPredicted RBP8.54□□□□□ -1.04
SYNE1-211ENST00000413186 COG4Q9H9E3 785 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 STOML2Q9UJZ1 356 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 PCDHB1Q9Y5F3 818 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 GMEB1Q9Y692 573 aa8.54□□□□□ -1.04
SYNE1-211ENST00000413186 GLYATL1P3A0A0U1RQE8 302 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 HIDE1A8MVS5 230 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 SUPT7LO94864 414 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 EPOP01588 193 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 TFE3P19532 575 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 PIK3CGP48736 1102 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 POLD2P49005 469 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 NAA20P61599 178 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 AP2B1P63010 937 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 MPP7Q5T2T1 576 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 TMEM173Q86WV6 379 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 MDM1Q8TC05 714 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 OSCP1Q8WVF1 389 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 APOPT1Q96IL0 206 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 FBXO10Q9UK96 956 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 CORO1CQ9ULV4 474 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 SOX13Q9UN79 622 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 CRYL1Q9Y2S2 319 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 DYRK1BQ9Y463 629 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 CASP8AP2Q9UKL3 1982 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 RBBP6Q7Z6E9 1792 aaKnown RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 PRMT5O14744 637 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 ZBTB14O43829 449 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 SNAP91O60641 907 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 SLC25A14O95258 325 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 MT-CYBP00156 380 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 HLA-DQB2P05538 268 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 ATF6P18850 670 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 CCND1P24385 295 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 INSCQ1MX18 579 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 ALFQ53S48 1182 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 C22orf39Q6P5X5 142 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 C16orf87Q6PH81 154 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 KYAT3Q6YP21 454 aaKnown RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 CPXM2Q8N436 756 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 VN1R2Q8NFZ6 395 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 SPACA7Q96KW9 195 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 P2RY13Q9BPV8 354 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 RHOJQ9H4E5 214 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 BPIFA1Q9NP55 256 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 AASDHPPTQ9NRN7 309 aa8.53□□□□□ -1.04
SYNE1-211ENST00000413186 G3BP2Q9UN86 482 aaKnown RBP8.53□□□□□ -1.04
SYNE1-211ENST00000413186 ATXN2Q99700 1313 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms