RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 SIGLEC6O43699 453 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 PMPCBO75439 489 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 CLDN7O95471 211 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 CSF2P04141 144 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 CELA2BP08218 269 aaPredicted RBP13.15□□□□□ -0.3
SSB-203ENST00000413002 GIMD1P0DJR0 217 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 NME1P15531 152 aaKnown RBP13.15□□□□□ -0.3
SSB-203ENST00000413002 NFKB1P19838 968 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 RBL1P28749 1068 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 CLDN6P56747 220 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 COPS2P61201 443 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 HNRNPKP61978 463 aaKnown RBP eCLIP13.15□□□□□ -0.3
SSB-203ENST00000413002 YPEL5P62699 121 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 CCZ1BP86790 482 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 CCZ1P86791 482 aaPredicted RBP13.15□□□□□ -0.3
SSB-203ENST00000413002 PTK2BQ14289 1009 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 AGERQ15109 404 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 NOMO1Q15155 1222 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 QPCTQ16769 361 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 FAXCQ5TGI0 409 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 ENPP7Q6UWV6 458 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 GLRX5Q86SX6 157 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 HID1Q8IV36 788 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 PHACTR4Q8IZ21 702 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 SYCE1Q8N0S2 351 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 ZNF567Q8N184 647 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 CBARPQ8N350 705 aaPredicted RBP13.15□□□□□ -0.3
SSB-203ENST00000413002 TXLNBQ8N3L3 684 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 ZNF548Q8NEK5 533 aaPredicted RBP13.15□□□□□ -0.3
SSB-203ENST00000413002 LMX1AQ8TE12 382 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 SCAMP4Q969E2 229 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 NUS1Q96E22 293 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 TEKT5Q96M29 485 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 QKIQ96PU8 341 aaKnown RBP eCLIP13.15□□□□□ -0.3
SSB-203ENST00000413002 SCNM1Q9BWG6 230 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 SLC25A51Q9H1U9 297 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 SUDS3Q9H7L9 328 aaPredicted RBP13.15□□□□□ -0.3
SSB-203ENST00000413002 LZTFL1Q9NQ48 299 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 HAUS2Q9NVX0 235 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 KLHL8Q9P2G9 620 aaPredicted RBP13.15□□□□□ -0.3
SSB-203ENST00000413002 KLK13Q9UKR3 277 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 WASF3Q9UPY6 502 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 PPIL1Q9Y3C6 166 aa13.15□□□□□ -0.3
SSB-203ENST00000413002 CHD8Q9HCK8 2581 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 LRRK1Q38SD2 2015 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 TCRBV7S2A1N4TA0A589 114 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 TMEM202A6NGA9 273 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 CAPN8A6NHC0 703 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 APOC4-APOC2K7ER74 178 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 ENC1O14682 589 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 GCATO75600 419 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 APOC2P02655 101 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 SLC4A1P02730 911 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 C1SP09871 688 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 EIF3EP60228 445 aaKnown RBP13.14□□□□□ -0.31
SSB-203ENST00000413002 PPARDQ03181 441 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 PTSQ03393 145 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 MTM1Q13496 603 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 NFATC4Q14934 902 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 ALG11Q2TAA5 492 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 DEFB133Q30KQ1 61 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 PRRT3Q5FWE3 981 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 PNCKQ6P2M8 343 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 MACC1Q6ZN28 852 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 PID1Q7Z2X4 250 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 TECPR1Q7Z6L1 1165 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 NDUFAF2Q8N183 169 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 UBL4BQ8N7F7 174 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 CCDC112Q8NEF3 446 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 HTR3CQ8WXA8 447 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 DTD2Q96FN9 168 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 IFT43Q96FT9 208 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 TRIB3Q96RU7 358 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 AGAP2Q99490 1192 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 MRPL40Q9NQ50 206 aaKnown RBP13.14□□□□□ -0.31
SSB-203ENST00000413002 APOBEC3BQ9UH17 382 aaKnown RBP13.14□□□□□ -0.31
SSB-203ENST00000413002 ANGPTL2Q9UKU9 493 aa13.14□□□□□ -0.31
SSB-203ENST00000413002 APOBEC2Q9Y235 224 aaKnown RBP13.14□□□□□ -0.31
SSB-203ENST00000413002 SPEGQ15772 3267 aa13.13□□□□□ -0.31
SSB-203ENST00000413002 C1orf232A0A0U1RR37 186 aa13.13□□□□□ -0.31
SSB-203ENST00000413002 ANKRD66B4E2M5 251 aa13.13□□□□□ -0.31
SSB-203ENST00000413002 H3BM21 787 aa13.13□□□□□ -0.31
SSB-203ENST00000413002 AQP9O43315 295 aa13.13□□□□□ -0.31
SSB-203ENST00000413002 KRT86O43790 486 aa13.13□□□□□ -0.31
SSB-203ENST00000413002 PTMAP06454 111 aaKnown RBP13.13□□□□□ -0.31
SSB-203ENST00000413002 CA4P22748 312 aa13.13□□□□□ -0.31
SSB-203ENST00000413002 NFKBIAP25963 317 aa13.13□□□□□ -0.31
SSB-203ENST00000413002 SRP54P61011 504 aaKnown RBP13.13□□□□□ -0.31
SSB-203ENST00000413002 CDK18Q07002 472 aa13.13□□□□□ -0.31
SSB-203ENST00000413002 ESRP1Q6NXG1 681 aaKnown RBP13.13□□□□□ -0.31
SSB-203ENST00000413002 DARS2Q6PI48 645 aaKnown RBP13.13□□□□□ -0.31
SSB-203ENST00000413002 DHRS13Q6UX07 377 aa13.13□□□□□ -0.31
SSB-203ENST00000413002 LYSMD3Q7Z3D4 306 aa13.13□□□□□ -0.31
SSB-203ENST00000413002 RNF10Q8N5U6 811 aaKnown RBP13.13□□□□□ -0.31
SSB-203ENST00000413002 OR4C6Q8NH72 309 aa13.13□□□□□ -0.31
SSB-203ENST00000413002 PTCD2Q8WV60 388 aaKnown RBP13.13□□□□□ -0.31
SSB-203ENST00000413002 OR1E3Q8WZA6 343 aa13.13□□□□□ -0.31
SSB-203ENST00000413002 PDXPQ96GD0 296 aa13.13□□□□□ -0.31
SSB-203ENST00000413002 OXNAD1Q96HP4 312 aaPredicted RBP13.13□□□□□ -0.31
SSB-203ENST00000413002 HES6Q96HZ4 224 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms