RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 CATSPERZQ9NTU4 200 aa11.64□□□□□ -0.55
SNRNP35-202ENST00000412157 POLR3BQ9NW08 1133 aaPredicted RBP11.64□□□□□ -0.55
SNRNP35-202ENST00000412157 MKS1Q9NXB0 559 aa11.64□□□□□ -0.55
SNRNP35-202ENST00000412157 GTSE1Q9NYZ3 720 aa11.64□□□□□ -0.55
SNRNP35-202ENST00000412157 IL36AQ9UHA7 158 aa11.64□□□□□ -0.55
SNRNP35-202ENST00000412157 NUMBLQ9Y6R0 609 aa11.64□□□□□ -0.55
SNRNP35-202ENST00000412157 C1orf232A0A0U1RR37 186 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 EDDM13A0A1B0GTR0 161 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 CCDC162PA2VCL2 907 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 OTOL1A6NHN0 477 aaPredicted RBP11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 PRRT4C9JH25 899 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 TPP1O14773 563 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 AURKAO14965 403 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 PFDN6O15212 129 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 TYROBPO43914 113 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 GPR37L1O60883 481 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 RFPL1O75677 317 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 ALPIP09923 528 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 CYP2A6P11509 494 aaPredicted RBP11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 XPAP23025 273 aaPredicted RBP11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 TYK2P29597 1187 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 LSP1P33241 339 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 POLD2P49005 469 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 CLCN5P51795 746 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 SLC12A2P55011 1212 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 IL9RQ01113 521 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 CTBP1Q13363 440 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 SMAD4Q13485 552 aaKnown RBP11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 HTR4Q13639 388 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 PTPRNQ16849 979 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 FASTKD1Q53R41 847 aaKnown RBP11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 TAF1BQ53T94 588 aaPredicted RBP11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 HHATQ5VTY9 493 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 BRAT1Q6PJG6 821 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 LYSMD3Q7Z3D4 306 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 GALNT7Q86SF2 657 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 SDCCAG8Q86SQ7 713 aaPredicted RBP11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 ZC3HC1Q86WB0 502 aaKnown RBP11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 DENND6AQ8IWF6 608 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 PHTF2Q8N3S3 785 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 CHST14Q8NCH0 376 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 OR2A12Q8NGT7 310 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 OR4L1Q8NH43 312 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 GRIN3AQ8TCU5 1115 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 OR8D1Q8WZ84 308 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 SPOCK2Q92563 424 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 ECHDC3Q96DC8 303 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 CDKN2AIPNLQ96HQ2 116 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 TSNARE1Q96NA8 513 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 KLHL32Q96NJ5 620 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 GPR22Q99680 433 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 PAIP2Q9BPZ3 127 aaKnown RBP11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 ZFYVE1Q9HBF4 777 aa11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 FBXO6Q9NRD1 293 aaPredicted RBP11.63□□□□□ -0.55
SNRNP35-202ENST00000412157 CKAP5Q14008 2032 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 FAM95CA0A1B0GW59 222 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 HMX2A2RU54 273 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 OR51F1A6NGY5 319 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 H3BQ06 376 aaPredicted RBP11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 CCL22O00626 93 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 CD3EAPO15446 510 aaKnown RBP11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 GLRA3O75311 464 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 KAT7O95251 611 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 PRNPP04156 253 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 MPOP05164 745 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 KCNA5P22460 613 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 PSMA3P25788 255 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 PMLP29590 882 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 RPA3P35244 121 aaPredicted RBP11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 GRIA2P42262 883 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 ABCG1P45844 678 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 CCT5P48643 541 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 NEK3P51956 506 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 ZNF234Q14588 700 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 PTPRCAPQ14761 206 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 LRRC14Q15048 493 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 TERF2Q15554 542 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 AARS2Q5JTZ9 985 aaKnown RBP11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 FSTL4Q6MZW2 842 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 SERPINA13PQ6UXR4 307 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 TPRG1Q6ZUI0 275 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 ALYREFQ86V81 257 aaKnown RBP11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 CILP2Q8IUL8 1156 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 SUGP1Q8IWZ8 645 aaKnown RBP11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 GPR150Q8NGU9 434 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 GDAP1Q8TB36 358 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 TCP10LQ8TDR4 215 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 SCG3Q8WXD2 468 aaKnown RBP11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 ISL2Q96A47 359 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 ELMO2Q96JJ3 720 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 SMIM14Q96QK8 99 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 C19orf43Q9BQ61 176 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 VPS11Q9H270 941 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 UBE2ZQ9H832 354 aaPredicted RBP11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 MLXIPLQ9NP71 852 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 C11orf16Q9NQ32 467 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 SNX15Q9NRS6 342 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 FKBPLQ9UIM3 349 aa11.62□□□□□ -0.55
SNRNP35-202ENST00000412157 SLC39A10Q9ULF5 831 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms