RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 IL15P40933 162 aaPredicted RBP1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 LUMP51884 338 aaPredicted RBP1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 DVL1P1P54792 670 aaPredicted RBP1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 NR1H2P55055 460 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 IRX1P78414 480 aaPredicted RBP1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 RPL24P83731 157 aaKnown RBP1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 PMP22Q01453 160 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 RUNX1T1Q06455 604 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 TDGQ13569 410 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 ENPP2Q13822 863 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 GTF2H2Q13888 395 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 ZNF239Q16600 458 aaKnown RBP1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 SIRPB2Q5JXA9 342 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 ZNF280DQ6N043 979 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 GTF2H2CQ6P1K8 395 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 PGBD2Q6P3X8 592 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 TAOK1Q7L7X3 1001 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 C11orf96Q7Z7L8 435 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 TBC1D26Q86UD7 250 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 APLFQ8IW19 511 aaPredicted RBP1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 SLC35F3Q8IY50 421 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 CPXM2Q8N436 756 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 ZNF843Q8N446 348 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 OR5R1Q8NH85 324 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 TMEM190Q8WZ59 177 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 ZNF653Q96CK0 615 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 ZC3HAV1LQ96H79 300 aaKnown RBP1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 ZNF414Q96IQ9 312 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 ST6GAL2Q96JF0 529 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 MTERF1Q99551 399 aaKnown RBP1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 VGLL1Q99990 258 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 MXRA8Q9BRK3 442 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 GLIS2Q9BZE0 524 aaPredicted RBP1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 TWSG1Q9GZX9 223 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 TTYH1Q9H313 450 aaPredicted RBP1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 MROH8Q9H579 483 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 PCDH9Q9HC56 1237 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 ARFGAP3Q9NP61 516 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 NLRC4Q9NPP4 1024 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 ENTPD7Q9NQZ7 604 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 TMEM181Q9P2C4 612 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 CACNG5Q9UF02 275 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 PADI3Q9ULW8 664 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 DNAJC16Q9Y2G8 782 aa1.41□□□□□ -2.18
RNU2-55P-201ENST00000411146 C17orf113A0A1B0GUU1 675 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 BLOC1S5-TXNDC5H3BN57 136 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 SEPT4O43236 478 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 FAM155BO75949 473 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 NDUFB4O95168 129 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 CSTBP04080 98 aaKnown RBP1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 CHRM4P08173 479 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 PRSS56P0CW18 603 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 RNF224P0DH78 156 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 SLC2A4P14672 509 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 AGAP20933 346 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 GATA2P23769 480 aaPredicted RBP1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 METAP2P50579 478 aaKnown RBP eCLIP1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 HSD17B4P51659 736 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 HNRNPH2P55795 449 aaKnown RBP1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 SEC61BP60468 96 aaKnown RBP1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 PITX1P78337 314 aaPredicted RBP1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 IRX6P78412 446 aaPredicted RBP1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 PDE1BQ01064 536 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 SPOCK1Q08629 439 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 ITGADQ13349 1161 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 PICALMQ13492 652 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 CTF1Q16619 201 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 EDRF1Q3B7T1 1238 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 MAP9Q49MG5 647 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 SLC45A4Q5BKX6 768 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 SLC27A1Q6PCB7 646 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 CCDC174Q6PII3 467 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 GPAT4Q86UL3 456 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 HAPLN4Q86UW8 402 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 TDRPQ86YL5 185 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 RNF113BQ8IZP6 322 aaKnown RBP1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 METTL27Q8N6F8 245 aaPredicted RBP1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 PLD5Q8N7P1 536 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 STPG4Q8N801 248 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 KCNH5Q8NCM2 988 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 AGBL3Q8NEM8 1001 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 ACVR1CQ8NER5 493 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 OR52I2Q8NH67 350 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 SPPL3Q8TCT6 385 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 AFG1LQ8WV93 481 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 RAB40AQ8WXH6 277 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 CNOT9Q92600 299 aaKnown RBP1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 STAMQ92783 540 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 GRAMD2BQ96HH9 432 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 ART5Q96L15 291 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 LRR1Q96L50 414 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 ZNF570Q96NI8 536 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 ELAC2Q9BQ52 826 aaKnown RBP1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 SYT17Q9BSW7 474 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 LRRC1Q9BTT6 524 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 PHF7Q9BWX1 381 aaPredicted RBP1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 PDZD7Q9H5P4 517 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 STN1Q9H668 368 aaKnown RBP1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 SMYD2Q9NRG4 433 aa1.4□□□□□ -2.19
RNU2-55P-201ENST00000411146 SNTG1Q9NSN8 517 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms