RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 SLCO3A1Q9UIG8 710 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 ANKRD6Q9Y2G4 727 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 PCDHB9Q9Y5E1 797 aa5.53□□□□□ -1.52
EPHA4-202ENST00000409854 FAM95CA0A1B0GW59 222 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 ARNTLO00327 626 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 HAUS5O94927 633 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 IL1BP01584 269 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 F7P08709 466 aaPredicted RBP5.52□□□□□ -1.53
EPHA4-202ENST00000409854 DLDP09622 509 aaKnown RBP5.52□□□□□ -1.53
EPHA4-202ENST00000409854 GKP32189 559 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 MTHFRP42898 656 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 CCT5P48643 541 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 STC1P52823 247 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 PRAMEP78395 509 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 DLX2Q07687 328 aaPredicted RBP5.52□□□□□ -1.53
EPHA4-202ENST00000409854 SEMA3AQ14563 771 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 PTPRCAPQ14761 206 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 EIF4HQ15056 248 aaKnown RBP5.52□□□□□ -1.53
EPHA4-202ENST00000409854 LRIT3Q3SXY7 679 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 HHATQ5VTY9 493 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 CES5AQ6NT32 575 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 DPY19L3Q6ZPD9 716 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 CMC1Q7Z7K0 106 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 LRRC34Q8IZ02 419 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 OR4K2Q8NGD2 314 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 OR6K2Q8NGY2 324 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 OR4L1Q8NH43 312 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 DYDC1Q8WWB3 177 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 EID2BQ96D98 161 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 CHFRQ96EP1 664 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 ZFYVE19Q96K21 471 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 RIPOR3Q96MK2 946 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 FAM111AQ96PZ2 611 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 C1QTNF1Q9BXJ1 281 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 PLA2G2FQ9BZM2 168 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 C12orf65Q9H3J6 166 aaKnown RBP5.52□□□□□ -1.53
EPHA4-202ENST00000409854 EBF3Q9H4W6 596 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 RABEP2Q9H5N1 569 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 INTS10Q9NVR2 710 aaKnown RBP5.52□□□□□ -1.53
EPHA4-202ENST00000409854 PHTF1Q9UMS5 762 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 MTCH2Q9Y6C9 303 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 A0A1W2PPC1 479 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 OR51F1A6NGY5 319 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 CCL22O00626 93 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 KLF11O14901 512 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 BIRC5O15392 142 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 CD3EAPO15446 510 aaKnown RBP5.52□□□□□ -1.53
EPHA4-202ENST00000409854 ECI2O75521 394 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 SLC35E2BP0CK96 405 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 COL6A2P12110 1019 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 LAMP2P13473 410 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 BMP1P13497 986 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 TYK2P29597 1187 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 EIF2DP41214 584 aaKnown RBP5.52□□□□□ -1.53
EPHA4-202ENST00000409854 ABL2P42684 1182 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 ABCG1P45844 678 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 RGS19P49795 217 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 XIAPP98170 497 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 POU4F1Q01851 419 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 ZNF789Q5FWF6 425 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 AP1ARQ63HQ0 302 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 GRAMD4Q6IC98 578 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 CNSTQ6PJW8 725 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 Q6ZVU0 165 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 PTAR1Q7Z6K3 402 aaPredicted RBP5.52□□□□□ -1.53
EPHA4-202ENST00000409854 TNS4Q8IZW8 715 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 CPA6Q8N4T0 437 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 RAB3IL1Q8TBN0 382 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 GRIN3AQ8TCU5 1115 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 HCAR2Q8TDS4 363 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 SH3GL3Q99963 347 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 SUV39H2Q9H5I1 410 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 CAB39LQ9H9S4 337 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 FBXO6Q9NRD1 293 aaPredicted RBP5.52□□□□□ -1.53
EPHA4-202ENST00000409854 CATSPERZQ9NTU4 200 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 WASF2Q9Y6W5 498 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 CDH23Q9H251 3354 aa5.52□□□□□ -1.53
EPHA4-202ENST00000409854 A0A096LPK6 155 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 TCP11X1B4DZS4 312 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 PRRT4C9JH25 899 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 GAPDHSO14556 408 aaPredicted RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 TPD52L2O43399 206 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 BUD23O43709 281 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 PLIN3O60664 434 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 TOP3BO95985 862 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 PROCP04070 461 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 ATP5BP06576 529 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 C2P06681 752 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 ALPIP09923 528 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 PSMC3P17980 439 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 OPRD1P41143 372 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 SLC6A11P48066 632 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 SERPINB4P48594 390 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 SUOXP51687 545 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 EPHB1P54762 984 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 RAB10P61026 200 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 MESP2Q0VG99 397 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 PEX6Q13608 980 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 RUNX3Q13761 415 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 PTPRRQ15256 657 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms