RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SCN8AQ9UQD0 1980 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 C1orf232A0A0U1RR37 186 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 SPTY2D1-AS1A0A0U1RR47 76 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 CACNB4O00305 520 aaPredicted RBP10.91□□□□□ -0.66
CHMP3-205ENST00000409810 PDE2AO00408 941 aaPredicted RBP10.91□□□□□ -0.66
CHMP3-205ENST00000409810 TM4SF5O14894 197 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 PRLP01236 227 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 EPOP01588 193 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 ITGAVP06756 1048 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 CEACAM1P13688 526 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 CD59P13987 128 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 TSHRP16473 764 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 HLA-DPA1P20036 260 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 KCNA4P22459 653 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 LHCGRP22888 699 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 KELP23276 732 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 EPHA8P29322 1005 aaPredicted RBP10.91□□□□□ -0.66
CHMP3-205ENST00000409810 ACTN2P35609 894 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 GRK6P43250 576 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 NOVA1P51513 510 aaKnown RBP10.91□□□□□ -0.66
CHMP3-205ENST00000409810 HNRNPKP61978 463 aaKnown RBP eCLIP10.91□□□□□ -0.66
CHMP3-205ENST00000409810 IL9RQ01113 521 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 IHHQ14623 411 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 NFATC4Q14934 902 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 P3H1Q32P28 736 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 HS1BP3Q53T59 392 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 ZNF569Q5MCW4 686 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 CRTC1Q6UUV9 634 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 MACC1Q6ZN28 852 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 ARHGEF18Q6ZSZ5 1173 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 ERMP1Q7Z2K6 904 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 TSPAN33Q86UF1 283 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 REXO1L1PQ8IX06 675 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 SLC22A18ASQ8N1D0 253 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 IPMKQ8NFU5 416 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 SPATA22Q8NHS9 363 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 SLC35B2Q8TB61 432 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 SETD7Q8WTS6 366 aaKnown RBP10.91□□□□□ -0.66
CHMP3-205ENST00000409810 BTN2A2Q8WVV5 523 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 TRIB3Q96RU7 358 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 TLR10Q9BXR5 811 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 WDR26Q9H7D7 661 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 ZFYVE1Q9HBF4 777 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 MBNL1Q9NR56 388 aaKnown RBP10.91□□□□□ -0.66
CHMP3-205ENST00000409810 DNAJC28Q9NX36 388 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 TRMT1Q9NXH9 659 aaKnown RBP10.91□□□□□ -0.66
CHMP3-205ENST00000409810 UBP1Q9NZI7 540 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 PKD2L2Q9NZM6 624 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 ZKSCAN5Q9Y2L8 839 aa10.91□□□□□ -0.66
CHMP3-205ENST00000409810 COL5A1P20908 1838 aaPredicted RBP10.91□□□□□ -0.66
CHMP3-205ENST00000409810 RGSL1A5PLK6 1076 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 C5orf60A6NFR6 353 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 CEP104O60308 925 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 KCNK5O95279 499 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 FGF1P05230 155 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 HOXC4P09017 264 aaPredicted RBP10.9□□□□□ -0.66
CHMP3-205ENST00000409810 NME1P15531 152 aaKnown RBP10.9□□□□□ -0.66
CHMP3-205ENST00000409810 PSMB4P28070 264 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 TEAD1P28347 426 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 STIP1P31948 543 aaKnown RBP10.9□□□□□ -0.66
CHMP3-205ENST00000409810 ETV3P41162 512 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 BLKP51451 505 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 STC1P52823 247 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 WNT3AP56704 352 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 KIAA1024LP59773 190 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 PTSQ03393 145 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 DPTQ07507 201 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 FZD2Q14332 565 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 INPP5AQ14642 412 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 PPM1JQ5JR12 505 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 RAET1GQ6H3X3 334 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 PSAPL1Q6NUJ1 521 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 KDELC1Q6UW63 502 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 DBX2Q6ZNG2 339 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 ZNF765Q7L2R6 523 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 KDELC2Q7Z4H8 507 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 HSD11B1LQ7Z5J1 315 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 PIP4P1Q86T03 277 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 NRSN1Q8IZ57 195 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 SLC35F6Q8N357 371 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 DEFB124Q8NES8 71 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 CCDC110Q8TBZ0 833 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 AP2M1Q96CW1 435 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 PBKQ96KB5 322 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 NAP1L3Q99457 506 aaPredicted RBP10.9□□□□□ -0.66
CHMP3-205ENST00000409810 TMEM121Q9BTD3 319 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 APOOQ9BUR5 198 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 TRABDQ9H4I3 376 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 C10orf88Q9H8K7 445 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 USP29Q9HBJ7 922 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 MAGEE1Q9HCI5 957 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 PHPT1Q9NRX4 125 aaPredicted RBP10.9□□□□□ -0.66
CHMP3-205ENST00000409810 RAD18Q9NS91 495 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 HOMER3Q9NSC5 361 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 HACD3Q9P035 362 aa10.9□□□□□ -0.66
CHMP3-205ENST00000409810 R3HDM2Q9Y2K5 976 aaKnown RBP10.9□□□□□ -0.66
CHMP3-205ENST00000409810 SPTBN2O15020 2390 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 ZFC3H1O60293 1989 aaKnown RBP10.89□□□□□ -0.67
CHMP3-205ENST00000409810 LOC285095A0A1B0GVY8 99 aa10.89□□□□□ -0.67
CHMP3-205ENST00000409810 TCRBV7S2A1N4TA0A589 114 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms