RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 SYNDIG1Q9H7V2 258 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 CYP4F12Q9HCS2 524 aa22.52■■□□□ 1.2
KDELR3-202ENST00000409006 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.52■■□□□ 1.2
KDELR3-202ENST00000409006 A0A1W2PQ67 120 aa22.51■■□□□ 1.19
KDELR3-202ENST00000409006 NTN3O00634 580 aaPredicted RBP22.51■■□□□ 1.19
KDELR3-202ENST00000409006 TCEA3O75764 348 aa22.51■■□□□ 1.19
KDELR3-202ENST00000409006 FUCA1P04066 466 aa22.51■■□□□ 1.19
KDELR3-202ENST00000409006 GARSP41250 739 aaKnown RBP22.51■■□□□ 1.19
KDELR3-202ENST00000409006 TLE3Q04726 772 aa22.51■■□□□ 1.19
KDELR3-202ENST00000409006 SLC18A3Q16572 532 aa22.51■■□□□ 1.19
KDELR3-202ENST00000409006 RFLNAQ6ZTI6 216 aa22.51■■□□□ 1.19
KDELR3-202ENST00000409006 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.51■■□□□ 1.19
KDELR3-202ENST00000409006 GPR156Q8NFN8 814 aa22.51■■□□□ 1.19
KDELR3-202ENST00000409006 PTCD2Q8WV60 388 aaKnown RBP22.51■■□□□ 1.19
KDELR3-202ENST00000409006 SCRN2Q96FV2 425 aa22.51■■□□□ 1.19
KDELR3-202ENST00000409006 WDR26Q9H7D7 661 aa22.51■■□□□ 1.19
KDELR3-202ENST00000409006 SMG1Q96Q15 3661 aaKnown RBP22.5■■□□□ 1.19
KDELR3-202ENST00000409006 A0A1W2PQM1 296 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 TNFRSF10CO14798 259 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 FZD6O60353 706 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 CCL7P80098 99 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 SPIDRQ14159 915 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 RALGPS1Q5JS13 557 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 ARMC12Q5T9G4 340 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 Q6ZVL8 140 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 TAF8Q7Z7C8 310 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 LSMEM2Q8N112 164 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 PQLC3Q8N755 202 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 KCTD6Q8NC69 237 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 MAML1Q92585 1016 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 DTD2Q96FN9 168 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 MCCC1Q96RQ3 725 aaPredicted RBP22.5■■□□□ 1.19
KDELR3-202ENST00000409006 MOSPD1Q9UJG1 213 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 PPIL1Q9Y3C6 166 aa22.5■■□□□ 1.19
KDELR3-202ENST00000409006 ATRXP46100 2492 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 BPTFQ12830 3046 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 PRSS38A1L453 326 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 NOBOXO60393 691 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 H2AFZP0C0S5 128 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 CYP2A6P11509 494 aaPredicted RBP22.49■■□□□ 1.19
KDELR3-202ENST00000409006 MYCLP1P12525 358 aaPredicted RBP22.49■■□□□ 1.19
KDELR3-202ENST00000409006 KELP23276 732 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 PCBP4P57723 403 aaKnown RBP22.49■■□□□ 1.19
KDELR3-202ENST00000409006 DSC2Q02487 901 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 ITKQ08881 620 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 SLC10A2Q12908 348 aaPredicted RBP22.49■■□□□ 1.19
KDELR3-202ENST00000409006 FAM182AQ5T1J6 154 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 OGFOD3Q6PK18 319 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 H2AFVQ71UI9 128 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 B3GNT8Q7Z7M8 397 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 HEATR4Q86WZ0 1026 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 ZNF248Q8NDW4 579 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 FAM46DQ8NEK8 389 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 FAF2Q96CS3 445 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 SLC46A1Q96NT5 459 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 LGMNQ99538 433 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 DNAJC7Q99615 494 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 ZNF670Q9BS34 389 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 TEX101Q9BY14 249 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 UVRAGQ9P2Y5 699 aa22.49■■□□□ 1.19
KDELR3-202ENST00000409006 CEACAM5P06731 702 aa22.48■■□□□ 1.19
KDELR3-202ENST00000409006 ERVPABLB-1P60509 514 aa22.48■■□□□ 1.19
KDELR3-202ENST00000409006 GBE1Q04446 702 aa22.48■■□□□ 1.19
KDELR3-202ENST00000409006 PDK2Q15119 407 aa22.48■■□□□ 1.19
KDELR3-202ENST00000409006 FOXR1Q6PIV2 292 aa22.48■■□□□ 1.19
KDELR3-202ENST00000409006 TECPR1Q7Z6L1 1165 aa22.48■■□□□ 1.19
KDELR3-202ENST00000409006 LRRC49Q8IUZ0 686 aa22.48■■□□□ 1.19
KDELR3-202ENST00000409006 OR8K1Q8NGG5 319 aa22.48■■□□□ 1.19
KDELR3-202ENST00000409006 WDR48Q8TAF3 677 aa22.48■■□□□ 1.19
KDELR3-202ENST00000409006 CTNNBL1Q8WYA6 563 aaPredicted RBP22.48■■□□□ 1.19
KDELR3-202ENST00000409006 RAPGEF5Q92565 580 aa22.48■■□□□ 1.19
KDELR3-202ENST00000409006 GRAMD1AQ96CP6 724 aa22.48■■□□□ 1.19
KDELR3-202ENST00000409006 CHP1Q99653 195 aa22.48■■□□□ 1.19
KDELR3-202ENST00000409006 SUDS3Q9H7L9 328 aaPredicted RBP22.48■■□□□ 1.19
KDELR3-202ENST00000409006 RBM22Q9NW64 420 aaKnown RBP eCLIP22.48■■□□□ 1.19
KDELR3-202ENST00000409006 PSMD11O00231 422 aa22.47■■□□□ 1.19
KDELR3-202ENST00000409006 MATN3O15232 486 aa22.47■■□□□ 1.19
KDELR3-202ENST00000409006 RPLP0P05388 317 aaKnown RBP22.47■■□□□ 1.19
KDELR3-202ENST00000409006 POLD2P49005 469 aa22.47■■□□□ 1.19
KDELR3-202ENST00000409006 CDK3Q00526 305 aa22.47■■□□□ 1.19
KDELR3-202ENST00000409006 SPECC1LQ69YQ0 1117 aa22.47■■□□□ 1.19
KDELR3-202ENST00000409006 ALG1LQ6GMV1 187 aa22.47■■□□□ 1.19
KDELR3-202ENST00000409006 IGF2-ASQ6U949 168 aa22.47■■□□□ 1.19
KDELR3-202ENST00000409006 Q8N9G6 341 aaPredicted RBP22.47■■□□□ 1.19
KDELR3-202ENST00000409006 ARRDC2Q8TBH0 407 aa22.47■■□□□ 1.19
KDELR3-202ENST00000409006 FCRL3Q96P31 734 aaPredicted RBP22.47■■□□□ 1.19
KDELR3-202ENST00000409006 TSGA13Q96PP4 275 aa22.47■■□□□ 1.19
KDELR3-202ENST00000409006 FRMD8Q9BZ67 464 aaPredicted RBP22.47■■□□□ 1.19
KDELR3-202ENST00000409006 FOXP3Q9BZS1 431 aa22.47■■□□□ 1.19
KDELR3-202ENST00000409006 POLR1EQ9GZS1 481 aaKnown RBP22.47■■□□□ 1.19
KDELR3-202ENST00000409006 CARS2Q9HA77 564 aaKnown RBP22.47■■□□□ 1.19
KDELR3-202ENST00000409006 CD84Q9UIB8 345 aa22.47■■□□□ 1.19
KDELR3-202ENST00000409006 PCDHGA8Q9Y5G5 932 aa22.47■■□□□ 1.19
KDELR3-202ENST00000409006 ST14Q9Y5Y6 855 aa22.47■■□□□ 1.19
KDELR3-202ENST00000409006 GOLGA6CA6NDK9 693 aa22.46■■□□□ 1.19
KDELR3-202ENST00000409006 GOLGA6BA6NDN3 693 aa22.46■■□□□ 1.19
KDELR3-202ENST00000409006 B4DGG1 531 aa22.46■■□□□ 1.19
KDELR3-202ENST00000409006 SOD1P00441 154 aa22.46■■□□□ 1.19
KDELR3-202ENST00000409006 PRLP01236 227 aa22.46■■□□□ 1.19
KDELR3-202ENST00000409006 HLA-DQB2P05538 268 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms