RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 TAF8Q7Z7C8 310 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 TP53INP2Q8IXH6 220 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 RHOT1Q8IXI2 618 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 SLC35F3Q8IY50 421 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 PGBD5Q8N414 524 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 RNF214Q8ND24 703 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 CCNYQ8ND76 341 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 SLC35G2Q8TBE7 412 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 FGF11Q92914 225 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 TSACCQ96A04 125 aaPredicted RBP9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 FUBP1Q96AE4 644 aaKnown RBP9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 CCDC97Q96F63 343 aaPredicted RBP9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 PDXPQ96GD0 296 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 CALR3Q96L12 384 aaKnown RBP9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 COQ10AQ96MF6 247 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 SRPK1Q96SB4 655 aaKnown RBP9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 ADGRE3Q9BY15 652 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 GSDMCQ9BYG8 508 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 STRADBQ9C0K7 418 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 NHEJ1Q9H9Q4 299 aaPredicted RBP9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 POLR1BQ9H9Y6 1135 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 THSD1Q9NS62 852 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 RAD18Q9NS91 495 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 RBM22Q9NW64 420 aaKnown RBP eCLIP9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 TRNAU1APQ9NX07 287 aaKnown RBP9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 GULP1Q9UBP9 304 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 MOSPD1Q9UJG1 213 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 PPIL1Q9Y3C6 166 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 U3KQA8 63 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 FREM2Q5SZK8 3169 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 ZZEF1O43149 2961 aa9.09□□□□□ -0.95
SNORD88A-201ENST00000408314 DMXL2Q8TDJ6 3036 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 A0A0J9YYE9 177 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 PRSS38A1L453 326 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 RGSL1A5PLK6 1076 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 GOLGA6CA6NDK9 693 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 GOLGA6BA6NDN3 693 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 CAPN8A6NHC0 703 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 SPOPO43791 374 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 BRINP1O60477 761 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 USP12O75317 370 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 DXOO77932 396 aaKnown RBP9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 TRBC1P01850 177 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 KRT1P04264 644 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 CD48P09326 243 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 GOLGA6DP0CG33 693 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 PNLIPP16233 465 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 CYLC1P35663 651 aaPredicted RBP9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 TNNT3P45378 269 aaPredicted RBP9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 GPR1P46091 355 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 GABREP78334 506 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 IFI35P80217 286 aaPredicted RBP9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 DPTQ07507 201 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 BIRC2Q13490 618 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 TCEAL1Q15170 157 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 SPA17Q15506 151 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 CLPPQ16740 277 aaPredicted RBP9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 BROXQ5VW32 411 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 DENND2CQ68D51 928 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 IGF2-ASQ6U949 168 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 NLRP8Q86W28 1048 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 HEATR4Q86WZ0 1026 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 NRSN1Q8IZ57 195 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 ARL14Q8N4G2 192 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 ZNF248Q8NDW4 579 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 CCHCR1Q8TD31 782 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 DCBLD2Q96PD2 775 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 RNF157Q96PX1 679 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 CCDC3Q9BQI4 270 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 FERMT1Q9BQL6 677 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 TDRD1Q9BXT4 1180 aaKnown RBP9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 PACSIN1Q9BY11 444 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 TEX101Q9BY14 249 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 TRIM5Q9C035 493 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 CLPBQ9H078 707 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 CDH19Q9H159 772 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 TCEAL2Q9H3H9 227 aaPredicted RBP9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 SYNDIG1Q9H7V2 258 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 CARS2Q9HA77 564 aaKnown RBP9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 CYP4F12Q9HCS2 524 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 FGF22Q9HCT0 170 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 GOLGA6AQ9NYA3 693 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 PKD2L2Q9NZM6 624 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 URB1O60287 2271 aaKnown RBP9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 DSPP15924 2871 aaKnown RBP9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 SHROOM3Q8TF72 1996 aa9.08□□□□□ -0.96
SNORD88A-201ENST00000408314 LRRK1Q38SD2 2015 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 CCDC187A0A096LP49 1063 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 TMEM202A6NGA9 273 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 NPIPB15A6NHN6 443 aaPredicted RBP9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 A8MX80 341 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 MTSS1O43312 755 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 PSTPIP1O43586 416 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 FZD6O60353 706 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 ZNF189O75820 626 aaPredicted RBP9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 IVLP07476 585 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 GLB1P16278 677 aa9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 EIF2S3P41091 472 aaKnown RBP9.07□□□□□ -0.96
SNORD88A-201ENST00000408314 ETV3P41162 512 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms