RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 TIE1P35590 1138 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 PJA1Q8NG27 643 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 SENP8Q96LD8 212 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 MFSD14AQ96MC6 490 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 NODALQ96S42 347 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 MNTQ99583 582 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 PLK2Q9NYY3 685 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 GPC6Q9Y625 555 aaPredicted RBP12.98□□□□□ -0.33
RNF43-201ENST00000407977 STX16-NPEPL1H3BU86 382 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 STX16O14662 325 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 SCELO95171 688 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 FADS2O95864 444 aaKnown RBP12.97□□□□□ -0.33
RNF43-201ENST00000407977 IFNGP01579 166 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 ERCC2P18074 760 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 SGCGQ13326 291 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 TAF13Q15543 124 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 LCN1P1Q5VSP4 162 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 C1QTNF7Q9BXJ2 289 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 TELO2Q9Y4R8 837 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 KIAA1210Q9ULL0 1709 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 FFAR3O14843 346 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 GPR42O15529 346 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 UGT1A5P35504 534 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 RAB2AP61019 212 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 HSPA14Q0VDF9 509 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 KHDC1Q4VXA5 237 aaKnown RBP12.97□□□□□ -0.33
RNF43-201ENST00000407977 FAM117BQ6P1L5 589 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 SLC30A10Q6XR72 485 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 STRADAQ7RTN6 431 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 MAB21L3Q8N8X9 362 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 OR4L1Q8NH43 312 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 ACP6Q9NPH0 428 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 KCNE2Q9Y6J6 123 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 ZBTB7AO95365 584 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 NELFEP18615 380 aaKnown RBP12.97□□□□□ -0.33
RNF43-201ENST00000407977 PTX3P26022 381 aaPredicted RBP12.97□□□□□ -0.33
RNF43-201ENST00000407977 ZNF157P51786 506 aaPredicted RBP12.97□□□□□ -0.33
RNF43-201ENST00000407977 AP3S2P59780 193 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 SMCO1Q147U7 214 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 TAPT1Q6NXT6 567 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 GK5Q6ZS86 529 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 RASSF6Q6ZTQ3 369 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 HASPINQ8TF76 798 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 ELMO1Q92556 727 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 C1GALT1C1Q96EU7 318 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 CADM1Q9BY67 442 aaKnown RBP12.97□□□□□ -0.33
RNF43-201ENST00000407977 MRPL9Q9BYD2 267 aaKnown RBP12.97□□□□□ -0.33
RNF43-201ENST00000407977 DSN1Q9H410 356 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 CD320Q9NPF0 282 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 TRPS1Q9UHF7 1281 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 BAIAP2Q9UQB8 552 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 PTCH2Q9Y6C5 1203 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 TISP43B9A030 160 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 PCDH8O95206 1070 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 MPSTP25325 297 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 HGSNATQ68CP4 663 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 TAF8Q7Z7C8 310 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 SKA1Q96BD8 255 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 NFKBIZQ9BYH8 718 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 TRIT1Q9H3H1 467 aaKnown RBP12.97□□□□□ -0.33
RNF43-201ENST00000407977 WDR55Q9H6Y2 383 aaPredicted RBP12.97□□□□□ -0.33
RNF43-201ENST00000407977 ERVK-5Q9HDB9 667 aa12.97□□□□□ -0.33
RNF43-201ENST00000407977 GOT1P17174 413 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 MMP8P22894 467 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 POLR2JP52435 117 aaKnown RBP12.96□□□□□ -0.33
RNF43-201ENST00000407977 SNRPD1P62314 119 aaKnown RBP12.96□□□□□ -0.33
RNF43-201ENST00000407977 SREBF2Q12772 1141 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 ZYG11AQ6WRX3 759 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 PIGZQ86VD9 579 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 SPPL2CQ8IUH8 684 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 OR52K2Q8NGK3 314 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 ELMO3Q96BJ8 720 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 PCDH18Q9HCL0 1135 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 MCUBQ9NWR8 336 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 SPG21Q9NZD8 308 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 REM1O75628 298 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 LDOC1O95751 146 aaPredicted RBP12.96□□□□□ -0.33
RNF43-201ENST00000407977 HLA-DQA2P01906 255 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 CCNYL3P0C7X3 344 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 BDNFP23560 247 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 ATP5C1P36542 298 aaKnown RBP12.96□□□□□ -0.33
RNF43-201ENST00000407977 ECT2LQ008S8 904 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 CTBP1Q13363 440 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 BRMS1LQ5PSV4 323 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 PIK3R6Q5UE93 754 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 CMC1Q7Z7K0 106 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 IRF2BP1Q8IU81 584 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 CBR4Q8N4T8 237 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 UROC1Q96N76 676 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 PHF12Q96QT6 1004 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 CITED4Q96RK1 184 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 TUBGCP5Q96RT8 1024 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 YME1L1Q96TA2 773 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 GSDMCQ9BYG8 508 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 YTHDF1Q9BYJ9 559 aaKnown RBP12.96□□□□□ -0.33
RNF43-201ENST00000407977 MED28Q9H204 178 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 PCDH12Q9NPG4 1184 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 PCDHGA10Q9Y5H3 936 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 AGPSO00116 658 aa12.96□□□□□ -0.33
RNF43-201ENST00000407977 H6PDO95479 791 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms