RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 CRTAMO95727 393 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 CYBAP13498 195 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 NDST2P52849 883 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 SQLEQ14534 574 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 MRPL10Q7Z7H8 261 aaKnown RBP11.91□□□□□ -0.5
PCNX4-204ENST00000406949 CCDC117Q8IWD4 279 aaPredicted RBP11.91□□□□□ -0.5
PCNX4-204ENST00000406949 CATSPER1Q8NEC5 780 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 OR6K2Q8NGY2 324 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 C19orf60Q96EN9 201 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 KCNA7Q96RP8 456 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 EGFL8Q99944 293 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 SH3GL3Q99963 347 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 APOL5Q9BWW9 433 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 C1QTNF1Q9BXJ1 281 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 GPR63Q9BZJ6 419 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 MRPL40Q9NQ50 206 aaKnown RBP11.91□□□□□ -0.5
PCNX4-204ENST00000406949 TAS2R13Q9NYV9 303 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 E7ENX8 843 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 RTN3O95197 1032 aaPredicted RBP11.91□□□□□ -0.5
PCNX4-204ENST00000406949 CLPTM1O96005 669 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 CYP11A1P05108 521 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 HGFP14210 728 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 TACR2P21452 398 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 MAGEA12P43365 314 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 C1QTNF8P60827 252 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 PLOD1Q02809 727 aaPredicted RBP11.91□□□□□ -0.5
PCNX4-204ENST00000406949 MSLNQ13421 630 aaPredicted RBP11.91□□□□□ -0.5
PCNX4-204ENST00000406949 CAPRIN1Q14444 709 aaKnown RBP11.91□□□□□ -0.5
PCNX4-204ENST00000406949 DEFB128Q7Z7B8 93 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 TRIM74Q86UV6 250 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 TRIM73Q86UV7 250 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 PDSS2Q86YH6 399 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 LSMEM2Q8N112 164 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 CARNMT1Q8N4J0 409 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 LPGAT1Q92604 370 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 IMP4Q96G21 291 aaKnown RBP11.91□□□□□ -0.5
PCNX4-204ENST00000406949 C1orf50Q9BV19 199 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 SLC25A23Q9BV35 468 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 GRIP2Q9C0E4 1043 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 OLA1Q9NTK5 396 aaKnown RBP11.91□□□□□ -0.5
PCNX4-204ENST00000406949 FAM8A1Q9UBU6 413 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 SCML2Q9UQR0 700 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 AP4S1Q9Y587 144 aa11.91□□□□□ -0.5
PCNX4-204ENST00000406949 A0A0U1RQS6 177 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 MYOCOSA0A1B0GUC4 107 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 H0Y626 953 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 B4GALT3O60512 393 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 GMNNO75496 209 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 S100BP04271 92 aaPredicted RBP11.9□□□□□ -0.5
PCNX4-204ENST00000406949 RPLP2P05387 115 aaKnown RBP11.9□□□□□ -0.5
PCNX4-204ENST00000406949 PYGLP06737 847 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 EEF1DP29692 281 aaKnown RBP11.9□□□□□ -0.5
PCNX4-204ENST00000406949 ATP5C1P36542 298 aaKnown RBP11.9□□□□□ -0.5
PCNX4-204ENST00000406949 CHN2P52757 468 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 ATN1P54259 1190 aaPredicted RBP11.9□□□□□ -0.5
PCNX4-204ENST00000406949 MS4A2Q01362 244 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 ZNF33AQ06730 810 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 MAP7Q14244 749 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 ACAP2Q15057 778 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 VPS26BQ4G0F5 336 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 SGO1Q5FBB7 561 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 TECRLQ5HYJ1 363 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 REP15Q6BDI9 236 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 ZFP1Q6P2D0 407 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 BNIPLQ7Z465 357 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 SMIM14Q96QK8 99 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 GPR62Q9BZJ7 368 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 TM6SF2Q9BZW4 377 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 C6orf203Q9P0P8 240 aaPredicted RBP11.9□□□□□ -0.5
PCNX4-204ENST00000406949 SEPT3Q9UH03 358 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 AFF4Q9UHB7 1163 aaKnown RBP11.9□□□□□ -0.5
PCNX4-204ENST00000406949 SLC30A1Q9Y6M5 507 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 TYW5A2RUC4 315 aaKnown RBP11.9□□□□□ -0.5
PCNX4-204ENST00000406949 PABPN1LA6NDY0 278 aaKnown RBP11.9□□□□□ -0.5
PCNX4-204ENST00000406949 SLC7A4O43246 635 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 NRP2O60462 931 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 KATNA1O75449 491 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 CKBP12277 381 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 ALOX15P16050 662 aaPredicted RBP11.9□□□□□ -0.5
PCNX4-204ENST00000406949 ACLYP53396 1101 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 ECT2LQ008S8 904 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 TRIP4Q15650 581 aaPredicted RBP11.9□□□□□ -0.5
PCNX4-204ENST00000406949 KLHDC9Q8NEP7 349 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 DBF4BQ8NFT6 615 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 NSUN5Q96P11 429 aaKnown RBP11.9□□□□□ -0.5
PCNX4-204ENST00000406949 TRIM8Q9BZR9 551 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 VCX3AQ9NNX9 186 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 SPAG4Q9NPE6 437 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 PFDN4Q9NQP4 134 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 GKN1Q9NS71 199 aa11.9□□□□□ -0.5
PCNX4-204ENST00000406949 PIP5K1BO14986 540 aa11.9□□□□□ -0.51
PCNX4-204ENST00000406949 GUCA1CO95843 209 aa11.9□□□□□ -0.51
PCNX4-204ENST00000406949 FGF1P05230 155 aa11.9□□□□□ -0.51
PCNX4-204ENST00000406949 SBK3P0C264 359 aa11.9□□□□□ -0.51
PCNX4-204ENST00000406949 PAX3P23760 479 aa11.9□□□□□ -0.51
PCNX4-204ENST00000406949 GSTT1P30711 240 aa11.9□□□□□ -0.51
PCNX4-204ENST00000406949 HTR7P34969 479 aa11.9□□□□□ -0.51
PCNX4-204ENST00000406949 FRG1Q14331 258 aaKnown RBP11.9□□□□□ -0.51
PCNX4-204ENST00000406949 TSNQ15631 228 aaKnown RBP11.9□□□□□ -0.51
PCNX4-204ENST00000406949 CLLU1OSQ5K130 101 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms