RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 TRAP1Q12931 704 aaKnown RBP14.05□□□□□ -0.16
DUSP28-202ENST00000405954 DGKZQ13574 1117 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 SPARTQ8N0X7 666 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 DCSTAMPQ9H295 470 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 MRPL39Q9NYK5 338 aaKnown RBP14.05□□□□□ -0.16
DUSP28-202ENST00000405954 RBAKQ9NYW8 714 aaPredicted RBP14.05□□□□□ -0.16
DUSP28-202ENST00000405954 FBXO40Q9UH90 709 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 EMCNQ9ULC0 261 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 OGDHLQ9ULD0 1010 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 DNAH12Q6ZR08 3092 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 TCAF2A6NFQ2 919 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 EFCAB9A8MZ26 197 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 RAD17O75943 681 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 PDGFRAP16234 1089 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 HK2P52789 917 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 GALK2Q01415 458 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 TAGLNQ01995 201 aaKnown RBP14.05□□□□□ -0.16
DUSP28-202ENST00000405954 BST2Q10589 180 aaKnown RBP14.05□□□□□ -0.16
DUSP28-202ENST00000405954 GRSF1Q12849 480 aaKnown RBP eCLIP14.05□□□□□ -0.16
DUSP28-202ENST00000405954 DSC3Q14574 896 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 SLC27A3Q5K4L6 730 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 TPRG1LQ5T0D9 272 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 HID1Q8IV36 788 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 BEND7Q8N7W2 519 aaPredicted RBP14.05□□□□□ -0.16
DUSP28-202ENST00000405954 OR13J1Q8NGT2 312 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 CSF3RQ99062 836 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 YTHDF1Q9BYJ9 559 aaKnown RBP14.05□□□□□ -0.16
DUSP28-202ENST00000405954 UCK2Q9BZX2 261 aa14.05□□□□□ -0.16
DUSP28-202ENST00000405954 HMGCRP04035 888 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 ZNF37AP17032 561 aaPredicted RBP14.04□□□□□ -0.16
DUSP28-202ENST00000405954 CLK2P49760 499 aaKnown RBP14.04□□□□□ -0.16
DUSP28-202ENST00000405954 KCNC4Q03721 635 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 SEZ6Q53EL9 994 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 DEFB132Q7Z7B7 95 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 CDKL3Q8IVW4 592 aaPredicted RBP14.04□□□□□ -0.16
DUSP28-202ENST00000405954 ZNF540Q8NDQ6 660 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 RDM1Q8NG50 284 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 OR6Q1Q8NGQ2 317 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 JOSD2Q8TAC2 188 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 NPLOC4Q8TAT6 608 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 URGCPQ8TCY9 931 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 PHF21AQ96BD5 680 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 PHF21BQ96EK2 531 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 DOK1Q99704 481 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 ZC3H12CQ9C0D7 883 aaKnown RBP14.04□□□□□ -0.16
DUSP28-202ENST00000405954 SLC35C2Q9NQQ7 365 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 CCDC59Q9P031 241 aaKnown RBP14.04□□□□□ -0.16
DUSP28-202ENST00000405954 VANGL2Q9ULK5 521 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 EIF3LQ9Y262 564 aaKnown RBP14.04□□□□□ -0.16
DUSP28-202ENST00000405954 U3KQV3 271 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 PLK4O00444 970 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 PLD2O14939 933 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 H2AFYO75367 372 aaKnown RBP14.04□□□□□ -0.16
DUSP28-202ENST00000405954 LRCH4O75427 683 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 CYP4B1P13584 511 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 ARRB2P32121 409 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 PGGT1BP53609 377 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 ZNF404Q494X3 552 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 VPS26BQ4G0F5 336 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 ZNF438Q7Z4V0 828 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 NETO2Q8NC67 525 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 NSMCE2Q96MF7 247 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 CLPBQ9H078 707 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 BFARQ9NZS9 450 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 MTF2Q9Y483 593 aaPredicted RBP14.04□□□□□ -0.16
DUSP28-202ENST00000405954 PCDHB3Q9Y5E6 796 aa14.04□□□□□ -0.16
DUSP28-202ENST00000405954 SEC14L2O76054 403 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 IL1R2P27930 398 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 MAP2K4P45985 399 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 SOX10P56693 466 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 COL16A1Q07092 1604 aaPredicted RBP14.03□□□□□ -0.16
DUSP28-202ENST00000405954 TNK2Q07912 1038 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 CATSPEREQ5SY80 951 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 LIPMQ5VYY2 423 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 PHF13Q86YI8 300 aaPredicted RBP14.03□□□□□ -0.16
DUSP28-202ENST00000405954 LYSMD2Q8IV50 215 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 CDAN1Q8IWY9 1227 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 TP53I13Q8NBR0 393 aaPredicted RBP14.03□□□□□ -0.16
DUSP28-202ENST00000405954 RHOXF1Q8NHV9 184 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 PEX13Q92968 403 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 CDK5RAP2Q96SN8 1893 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 APOL4Q9BPW4 351 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.03□□□□□ -0.16
DUSP28-202ENST00000405954 DIABLOQ9NR28 239 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 NDFIP2Q9NV92 336 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 SBF2Q86WG5 1849 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 SCO2O43819 266 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 LRIG2O94898 1065 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 FTH1P02794 183 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 TP53P04637 393 aaPredicted RBP14.03□□□□□ -0.16
DUSP28-202ENST00000405954 SPNP16150 400 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 CYP24A1Q07973 514 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 KCNJ11Q14654 390 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 INTS11Q5TA45 600 aaKnown RBP14.03□□□□□ -0.16
DUSP28-202ENST00000405954 SLC51BQ86UW2 128 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 MFSD2AQ8NA29 543 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 C7orf57Q8NEG2 295 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 TUBGCP3Q96CW5 907 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 APOL2Q9BQE5 337 aa14.03□□□□□ -0.16
DUSP28-202ENST00000405954 RHOBTB2Q9BYZ6 727 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms