RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SMAD1Q15797 465 aaKnown RBP21.04■□□□□ 0.96
TPM1-208ENST00000404484 SEPT7Q16181 437 aaKnown RBP21.04■□□□□ 0.96
TPM1-208ENST00000404484 ZNF470Q6ECI4 717 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 Q6ZVU0 165 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 ANKRD42Q8N9B4 389 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 BANPQ8N9N5 519 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 C2CD4AQ8NCU7 369 aaPredicted RBP21.04■□□□□ 0.96
TPM1-208ENST00000404484 CSGALNACT1Q8TDX6 532 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 CYB5D2Q8WUJ1 264 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 DYDC1Q8WWB3 177 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 PIH1D2Q8WWB5 315 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 SCG3Q8WXD2 468 aaKnown RBP21.04■□□□□ 0.96
TPM1-208ENST00000404484 HDAC10Q969S8 669 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 SERAC1Q96JX3 654 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 DNAJC1Q96KC8 554 aaKnown RBP21.04■□□□□ 0.96
TPM1-208ENST00000404484 C19orf43Q9BQ61 176 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 PLA2G4CQ9UP65 541 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 SIT1Q9Y3P8 196 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 PIAS3Q9Y6X2 628 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 CACNA1HO95180 2353 aa21.04■□□□□ 0.96
TPM1-208ENST00000404484 OTOL1A6NHN0 477 aaPredicted RBP21.03■□□□□ 0.96
TPM1-208ENST00000404484 GOLGA8TH3BQL2 631 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 SPAG7O75391 227 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 RFPL1O75677 317 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 PYGBP11216 843 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 SOX9P48436 509 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 SERPINB8P50452 374 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 DPY19L3Q6ZPD9 716 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 NUDT18Q6ZVK8 323 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 OTUD6BQ8N6M0 293 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 FRS2Q8WU20 508 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 UCMAQ8WVF2 138 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 IQCGQ9H095 443 aaKnown RBP21.03■□□□□ 0.96
TPM1-208ENST00000404484 SUV39H2Q9H5I1 410 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 ZDHHC6Q9H6R6 413 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 GGT7Q9UJ14 662 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 FBXO5Q9UKT4 447 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 PHTF1Q9UMS5 762 aa21.03■□□□□ 0.96
TPM1-208ENST00000404484 A0A0J9YYE9 177 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 HMX2A2RU54 273 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 COPEO14579 308 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 BNIP3LO60238 219 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 TRBC1P01850 177 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 SLC8A1P32418 973 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 LSP1P33241 339 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 ABL2P42684 1182 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 ITPRIPL2Q3MIP1 535 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 MRNIPQ6NTE8 343 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 AFTPHQ6ULP2 937 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 ZNF852Q6ZMS4 543 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 SH2D5Q6ZV89 423 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 TERB1Q8NA31 727 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 ISL2Q96A47 359 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 ECHDC3Q96DC8 303 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 LRIG1Q96JA1 1093 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 VPS39Q96JC1 886 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 CABS1Q96KC9 395 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 HEPHQ9BQS7 1158 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 MCMBPQ9BTE3 642 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 OSBPL1AQ9BXW6 950 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 HCN4Q9Y3Q4 1203 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 ZNF711Q9Y462 761 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 TICRRQ7Z2Z1 1910 aa21.02■□□□□ 0.96
TPM1-208ENST00000404484 FAM170BA6NMN3 283 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 GOLGA8RI6L899 631 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 STX7O15400 261 aaKnown RBP21.02■□□□□ 0.95
TPM1-208ENST00000404484 DCNP07585 359 aaKnown RBP21.02■□□□□ 0.95
TPM1-208ENST00000404484 GLULP15104 373 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 NFKBIAP25963 317 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 GJA4P35212 333 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 SLC1A2P43004 574 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 SLC6A11P48066 632 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 CD151P48509 253 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 POLR2LP62875 67 aaKnown RBP21.02■□□□□ 0.95
TPM1-208ENST00000404484 KDSRQ06136 332 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 UBXN2BQ14CS0 331 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 E2F5Q15329 346 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 ZC3HC1Q86WB0 502 aaKnown RBP21.02■□□□□ 0.95
TPM1-208ENST00000404484 MDGA1Q8NFP4 955 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 PJA1Q8NG27 643 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 OR2A12Q8NGT7 310 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 GPR150Q8NGU9 434 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 MGARPQ8TDB4 240 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 TBATAQ96M53 351 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 KLF6Q99612 283 aaPredicted RBP21.02■□□□□ 0.95
TPM1-208ENST00000404484 GPR63Q9BZJ6 419 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 LTB4R2Q9NPC1 389 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 PKP3Q9Y446 797 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 KCTD3Q9Y597 815 aa21.02■□□□□ 0.95
TPM1-208ENST00000404484 CAPN8A6NHC0 703 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 MAN2B1O00754 1011 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 OGNP20774 298 aaKnown RBP21.01■□□□□ 0.95
TPM1-208ENST00000404484 GKP32189 559 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 CCT5P48643 541 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 ARSDP51689 593 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 IL9RQ01113 521 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 MPP2Q14168 576 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 PTPRNQ16849 979 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 TTC19Q6DKK2 380 aaPredicted RBP21.01■□□□□ 0.95
TPM1-208ENST00000404484 FSTL4Q6MZW2 842 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms