RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 TOR1BO14657 336 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 CA4P22748 312 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 CTNNA1P35221 906 aaKnown RBP18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 SRP54P61011 504 aaKnown RBP18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 GALNT3Q14435 633 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 PRKD1Q15139 912 aaPredicted RBP18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 PNCKQ6P2M8 343 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 NDUFAF2Q8N183 169 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 KIAA1524Q8TCG1 905 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 TFB1MQ8WVM0 346 aaKnown RBP18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 BTN2A2Q8WVV5 523 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 P3H4Q92791 437 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 GATA6Q92908 595 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 DTD2Q96FN9 168 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 APOLD1Q96LR9 279 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 WDR92Q96MX6 357 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 LGR4Q9BXB1 951 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 TMEM121BQ9BXQ6 578 aaPredicted RBP18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 WDR26Q9H7D7 661 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 SUDS3Q9H7L9 328 aaPredicted RBP18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 A0A0J9YYE9 177 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 CAPN8A6NHC0 703 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 GOLGA6L6A8MZA4 724 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 F5H423 210 aaPredicted RBP18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 CACNB4O00305 520 aaPredicted RBP18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 PJA2O43164 708 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 TRBC1P01850 177 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 TSHRP16473 764 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 TGM2P21980 687 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 HK3P52790 923 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 PCSK7Q16549 785 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 ESRP1Q6NXG1 681 aaKnown RBP18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 AADACL2Q6P093 401 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 TMPRSS7Q7RTY8 843 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 LRRC57Q8N9N7 239 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 SPATA22Q8NHS9 363 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 OR1E3Q8WZA6 343 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 HERPUD2Q9BSE4 406 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 CLPBQ9H078 707 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 BRD8Q9H0E9 1235 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 C10orf88Q9H8K7 445 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 FGF22Q9HCT0 170 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 MRPL40Q9NQ50 206 aaKnown RBP18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 MOSPD1Q9UJG1 213 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 PPIL1Q9Y3C6 166 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 PCDHGA1Q9Y5H4 931 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 PCDHA3Q9Y5H8 950 aa18.17■□□□□ 0.5
PTPRN2-204ENST00000404321 FRYQ5TBA9 3013 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 RASGRP1O95267 797 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 C1SP09871 688 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 PTPN3P26045 913 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 NR2C2P49116 596 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 KIF5AQ12840 1032 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 SMAD1Q15797 465 aaKnown RBP18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 QPCTQ16769 361 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 ST3GAL2Q16842 350 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 CCDC181Q5TID7 509 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 RAET1GQ6H3X3 334 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 CCNI2Q6ZMN8 369 aaPredicted RBP18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 BBS12Q6ZW61 710 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 BZW1Q7L1Q6 419 aaKnown RBP18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 NT5DC3Q86UY8 548 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 HEATR4Q86WZ0 1026 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 CBARPQ8N350 705 aaPredicted RBP18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 OR56A4Q8NGH8 313 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 SCAMP4Q969E2 229 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 IMP4Q96G21 291 aaKnown RBP18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 UBP1Q9NZI7 540 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 CSNK1G3Q9Y6M4 447 aa18.16■□□□□ 0.5
PTPRN2-204ENST00000404321 ANKRD36A6QL64 1941 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 AKAP13Q12802 2813 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 LY6G6EA0A0G2JKS1 128 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 FAM221BA6H8Z2 402 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 PSMD11O00231 422 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 CLDN7O95471 211 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 FTCDO95954 541 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 MT-CYBP00156 380 aaPredicted RBP18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 ANXA6P08133 673 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 CKMT1AP12532 417 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 CTSEP14091 401 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 ACP1P24666 158 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 TRIM23P36406 574 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 KIAA1024LP59773 190 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 PTSQ03393 145 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 PPP2R5EQ16537 467 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 CDKN3Q16667 212 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 TEX44Q53QW1 395 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 TECPR1Q7Z6L1 1165 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 ATL2Q8NHH9 583 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 ALG3Q92685 438 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 FAM118BQ9BPY3 351 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 DUSP23Q9BVJ7 150 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 GLOD4Q9HC38 313 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 PACSIN2Q9UNF0 486 aaPredicted RBP18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 DOLKQ9UPQ8 538 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 U3KQA8 63 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 COL5A1P20908 1838 aaPredicted RBP18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 EPG5Q9HCE0 2579 aa18.15■□□□□ 0.5
PTPRN2-204ENST00000404321 C1orf232A0A0U1RR37 186 aa18.14■□□□□ 0.49
PTPRN2-204ENST00000404321 CPED1A4D0V7 1026 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms