RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 ZNF653Q96CK0 615 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 EIF3CQ99613 913 aaKnown RBP12.39□□□□□ -0.43
PRAME-204ENST00000403441 DPEP2Q9H4A9 486 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 WDR26Q9H7D7 661 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 PDFQ9HBH1 243 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 FGF22Q9HCT0 170 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 MRPL47Q9HD33 250 aaKnown RBP12.39□□□□□ -0.43
PRAME-204ENST00000403441 ABHD10Q9NUJ1 306 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 LRIT1Q9P2V4 623 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 PCDHGA4Q9Y5G9 962 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 NAV2Q8IVL1 2488 aa12.39□□□□□ -0.43
PRAME-204ENST00000403441 LRRK1Q38SD2 2015 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 TMEM202A6NGA9 273 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 ARHGAP42A6NI28 874 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 AGRPO00253 132 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 PDE2AO00408 941 aaPredicted RBP12.38□□□□□ -0.43
PRAME-204ENST00000403441 TNFRSF10CO14798 259 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 ZW10O43264 779 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 NUDT21O43809 227 aaKnown RBP12.38□□□□□ -0.43
PRAME-204ENST00000403441 BUB1BO60566 1050 aaPredicted RBP12.38□□□□□ -0.43
PRAME-204ENST00000403441 LRCH4O75427 683 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 PALMO75781 387 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 RECQL5O94762 991 aaPredicted RBP12.38□□□□□ -0.43
PRAME-204ENST00000403441 PRKCGP05129 697 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 FAM87AP0C7U9 286 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 ITIH1P19827 911 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 CD82P27701 267 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 PCK1P35558 622 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 CSNK1DP48730 415 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 NDST2P52849 883 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 POLR2LP62875 67 aaKnown RBP12.38□□□□□ -0.43
PRAME-204ENST00000403441 ZFP36L1Q07352 338 aaKnown RBP12.38□□□□□ -0.43
PRAME-204ENST00000403441 BCL2L1Q07817 233 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 HLTFQ14527 1009 aaKnown RBP eCLIP12.38□□□□□ -0.43
PRAME-204ENST00000403441 SLC18A3Q16572 532 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 LINC00303Q3SY05 128 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 TMEM164Q5U3C3 297 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 KCTD16Q68DU8 428 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 ALKBH5Q6P6C2 394 aaKnown RBP12.38□□□□□ -0.43
PRAME-204ENST00000403441 OGFOD3Q6PK18 319 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 ATG14Q6ZNE5 492 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 NYAP1Q6ZVC0 841 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 SRLQ86TD4 932 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 VASH2Q86V25 355 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 GAS2L3Q86XJ1 694 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 PSTKQ8IV42 348 aaKnown RBP12.38□□□□□ -0.43
PRAME-204ENST00000403441 FUBP1Q96AE4 644 aaKnown RBP12.38□□□□□ -0.43
PRAME-204ENST00000403441 PEBP4Q96S96 227 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 CINPQ9BW66 212 aaPredicted RBP12.38□□□□□ -0.43
PRAME-204ENST00000403441 THAP2Q9H0W7 228 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 RBSNQ9H1K0 784 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 LRRC19Q9H756 370 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 CYP4F12Q9HCS2 524 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 MOSPD1Q9UJG1 213 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 RNF215Q9Y6U7 377 aa12.38□□□□□ -0.43
PRAME-204ENST00000403441 ANKRD36A6QL64 1941 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 UNC13CQ8NB66 2214 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 J3KR12 359 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 HOXC4P09017 264 aaPredicted RBP12.37□□□□□ -0.43
PRAME-204ENST00000403441 PSMA2P25787 234 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 MAPK10P53779 464 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 SRSF6Q13247 344 aaKnown RBP12.37□□□□□ -0.43
PRAME-204ENST00000403441 PIM3Q86V86 326 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 ZFAND4Q86XD8 727 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 ZSWIM9Q86XI8 627 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 SLITRK4Q8IW52 837 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 TSEN2Q8NCE0 465 aaKnown RBP12.37□□□□□ -0.43
PRAME-204ENST00000403441 USP7Q93009 1102 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 MRFAP1L1Q96HT8 127 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 CELF6Q96J87 481 aaKnown RBP12.37□□□□□ -0.43
PRAME-204ENST00000403441 TRIM4Q9C037 500 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 B3GNT4Q9C0J1 378 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 TMEM168Q9H0V1 697 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 SP110Q9HB58 689 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 MRPL40Q9NQ50 206 aaKnown RBP12.37□□□□□ -0.43
PRAME-204ENST00000403441 STARD5Q9NSY2 213 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 FOXJ2Q9P0K8 574 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 IL17BQ9UHF5 180 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 SCN8AQ9UQD0 1980 aa12.37□□□□□ -0.43
PRAME-204ENST00000403441 PRSS38A1L453 326 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 RHPN2P1A8MT19 583 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 EEF2KO00418 725 aaKnown RBP12.36□□□□□ -0.43
PRAME-204ENST00000403441 DAPK3O43293 454 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 CPNE6O95741 557 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 MIPP30301 263 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 TRIM23P36406 574 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 RGRP47804 291 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 PAPOLAP51003 745 aaKnown RBP12.36□□□□□ -0.43
PRAME-204ENST00000403441 AP1S1P61966 158 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 ILF3Q12906 894 aaKnown RBP eCLIP12.36□□□□□ -0.431e-15■■■□□ 16.5
PRAME-204ENST00000403441 RALGDSQ12967 914 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 BIRC2Q13490 618 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 RFTN1Q14699 578 aaPredicted RBP12.36□□□□□ -0.43
PRAME-204ENST00000403441 ACOX1Q15067 660 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 CA9Q16790 459 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 LIPIQ6XZB0 460 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 DPPA4Q7L190 304 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 CNGA4Q8IV77 575 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 TC2NQ8N9U0 490 aa12.36□□□□□ -0.43
PRAME-204ENST00000403441 ECHDC3Q96DC8 303 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms