RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 CUZD1Q86UP6 607 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 KIRREL3Q8IZU9 778 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 FBXW8Q8N3Y1 598 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 MAB21L3Q8N8X9 362 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 SHKBP1Q8TBC3 707 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 TRMT2BQ96GJ1 504 aaKnown RBP17.9■□□□□ 0.46
CHTOP-205ENST00000403433 MAELQ96JY0 434 aaKnown RBP17.9■□□□□ 0.46
CHTOP-205ENST00000403433 TRMOQ9BU70 441 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 ZBTB26Q9HCK0 441 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 BATF3Q9NR55 127 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 INTS10Q9NVR2 710 aaKnown RBP17.9■□□□□ 0.46
CHTOP-205ENST00000403433 SKAP2O75563 359 aaPredicted RBP17.9■□□□□ 0.46
CHTOP-205ENST00000403433 ABLIM3O94929 683 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 SOD2P04179 222 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 CR2P20023 1033 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 SP100P23497 879 aaPredicted RBP17.9■□□□□ 0.46
CHTOP-205ENST00000403433 SUOXP51687 545 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 GALNT1Q10472 559 aaPredicted RBP17.9■□□□□ 0.46
CHTOP-205ENST00000403433 PDAP1Q13442 181 aaKnown RBP17.9■□□□□ 0.46
CHTOP-205ENST00000403433 TAF1AQ15573 450 aaPredicted RBP17.9■□□□□ 0.46
CHTOP-205ENST00000403433 RNF219Q5W0B1 726 aaPredicted RBP17.9■□□□□ 0.46
CHTOP-205ENST00000403433 C16orf59Q7L2K0 433 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 ISCA2Q86U28 154 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 HERC6Q8IVU3 1022 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 CEP70Q8NHQ1 597 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 CDKN2AIPNLQ96HQ2 116 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 MARK4Q96L34 752 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 KLF16Q9BXK1 252 aaPredicted RBP17.9■□□□□ 0.46
CHTOP-205ENST00000403433 TDRD1Q9BXT4 1180 aaKnown RBP17.9■□□□□ 0.46
CHTOP-205ENST00000403433 PRPF19Q9UMS4 504 aaKnown RBP17.9■□□□□ 0.46
CHTOP-205ENST00000403433 TBC1D30Q9Y2I9 924 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 SPO11Q9Y5K1 396 aa17.9■□□□□ 0.46
CHTOP-205ENST00000403433 BAG2O95816 211 aa17.89■□□□□ 0.45
CHTOP-205ENST00000403433 PENKP01210 267 aaPredicted RBP17.89■□□□□ 0.45
CHTOP-205ENST00000403433 CD1DP15813 335 aa17.89■□□□□ 0.45
CHTOP-205ENST00000403433 IMPDH1P20839 514 aa17.89■□□□□ 0.45
CHTOP-205ENST00000403433 NFKB2Q00653 900 aa17.89■□□□□ 0.45
CHTOP-205ENST00000403433 IKBKEQ14164 716 aa17.89■□□□□ 0.45
CHTOP-205ENST00000403433 CYTH1Q15438 398 aa17.89■□□□□ 0.45
CHTOP-205ENST00000403433 KYQ8NBH2 561 aa17.89■□□□□ 0.45
CHTOP-205ENST00000403433 EXT2Q93063 718 aa17.89■□□□□ 0.45
CHTOP-205ENST00000403433 L3HYPDHQ96EM0 354 aa17.89■□□□□ 0.45
CHTOP-205ENST00000403433 TTC1Q99614 292 aa17.89■□□□□ 0.45
CHTOP-205ENST00000403433 AARSD1Q9BTE6 412 aaKnown RBP17.89■□□□□ 0.45
CHTOP-205ENST00000403433 RNF38Q9H0F5 515 aa17.89■□□□□ 0.45
CHTOP-205ENST00000403433 TRPC7Q9HCX4 862 aa17.89■□□□□ 0.45
CHTOP-205ENST00000403433 S100A14Q9HCY8 104 aa17.89■□□□□ 0.45
CHTOP-205ENST00000403433 PAK6Q9NQU5 681 aaPredicted RBP17.89■□□□□ 0.45
CHTOP-205ENST00000403433 MRGBPQ9NV56 204 aa17.89■□□□□ 0.45
CHTOP-205ENST00000403433 COPG1Q9Y678 874 aaKnown RBP17.89■□□□□ 0.45
CHTOP-205ENST00000403433 C2orf78A6NCI8 922 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 C2orf81A6NN90 581 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 ZNF37AP17032 561 aaPredicted RBP17.88■□□□□ 0.45
CHTOP-205ENST00000403433 PPP3CCP48454 512 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 MTTPP55157 894 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 ANKRD33Q7Z3H0 272 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 HPS6Q86YV9 775 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 RYBPQ8N488 228 aaPredicted RBP17.88■□□□□ 0.45
CHTOP-205ENST00000403433 LPCAT1Q8NF37 534 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 PTERQ96BW5 349 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 TMEM169Q96HH4 297 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 SERPINI1Q99574 410 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 CCDC68Q9H2F9 335 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 GSTO2Q9H4Y5 243 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 MEAF6Q9HAF1 191 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 PPM1HQ9ULR3 514 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 POMPQ9Y244 141 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 MTF2Q9Y483 593 aaPredicted RBP17.88■□□□□ 0.45
CHTOP-205ENST00000403433 ANAPC1Q9H1A4 1944 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 PLXNA4Q9HCM2 1894 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 UBA6A0AVT1 1052 aaPredicted RBP17.88■□□□□ 0.45
CHTOP-205ENST00000403433 PRRG1O14668 218 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 DSG1Q02413 1049 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 CCNIQ14094 377 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 TCHHL1Q5QJ38 904 aaPredicted RBP17.88■□□□□ 0.45
CHTOP-205ENST00000403433 ZNF678Q5SXM1 525 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 CXorf57Q6NSI4 855 aaKnown RBP17.88■□□□□ 0.45
CHTOP-205ENST00000403433 RPS27LQ71UM5 84 aaKnown RBP17.88■□□□□ 0.45
CHTOP-205ENST00000403433 RAB44Q7Z6P3 723 aaPredicted RBP17.88■□□□□ 0.45
CHTOP-205ENST00000403433 DSELQ8IZU8 1212 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 OR4K2Q8NGD2 314 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 SLC26A7Q8TE54 656 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 SH3RF2Q8TEC5 729 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 RCN3Q96D15 328 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 NSMCE3Q96MG7 304 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 ZNF558Q96NG5 402 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 ADGRE3Q9BY15 652 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 YY1AP1Q9H869 796 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 SMPD4Q9NXE4 827 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 RAI2Q9Y5P3 530 aa17.88■□□□□ 0.45
CHTOP-205ENST00000403433 GBF1Q92538 1859 aa17.87■□□□□ 0.45
CHTOP-205ENST00000403433 RHOBTB1O94844 696 aa17.87■□□□□ 0.45
CHTOP-205ENST00000403433 SUPT7LO94864 414 aa17.87■□□□□ 0.45
CHTOP-205ENST00000403433 SORBS2O94875 1100 aaKnown RBP17.87■□□□□ 0.45
CHTOP-205ENST00000403433 C1RP00736 705 aa17.87■□□□□ 0.45
CHTOP-205ENST00000403433 MBL2P11226 248 aaPredicted RBP17.87■□□□□ 0.45
CHTOP-205ENST00000403433 CDC25CP30307 473 aa17.87■□□□□ 0.45
CHTOP-205ENST00000403433 HERVK_113P63132 956 aa17.87■□□□□ 0.45
CHTOP-205ENST00000403433 TIAL1Q01085 375 aaKnown RBP eCLIP17.87■□□□□ 0.453e-8■■■□□ 16.2
CHTOP-205ENST00000403433 CNKSR3Q6P9H4 555 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms