RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 CD3EAPO15446 510 aaKnown RBP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 TLR5O60602 858 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 CHEK2O96017 543 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 GOT2P00505 430 aaKnown RBP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 LIN52Q52LA3 116 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 SLC44A4Q53GD3 710 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 MS4A13Q5J8X5 152 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 SIRPB2Q5JXA9 342 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 VARS2Q5ST30 1063 aaKnown RBP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 DENND5AQ6IQ26 1287 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 ZFP1Q6P2D0 407 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 PGM2L1Q6PCE3 622 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 MFSD6LQ8IWD5 586 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 LSMEM2Q8N112 164 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 C2CD4AQ8NCU7 369 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 LPCAT1Q8NF37 534 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 PBXIP1Q96AQ6 731 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 PKP2Q99959 881 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 CORO1BQ9BR76 489 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 MUC3BQ9H195 1237 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 MRPL40Q9NQ50 206 aaKnown RBP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 OSER1Q9NX31 292 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 SMPD4Q9NXE4 827 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 CD274Q9NZQ7 290 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 C6orf203Q9P0P8 240 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 ZNF711Q9Y462 761 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 ACTL7AQ9Y615 435 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 PLXNA1Q9UIW2 1896 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 ALDH2P05091 517 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 PRSS56P0CW18 603 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 PRKAR2AP13861 404 aaKnown RBP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 RHOQP17081 205 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 ITGB6P18564 788 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 SH3BGRP55822 239 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 PLOD1Q02809 727 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 SULT2A1Q06520 285 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 OR52E8Q6IFG1 317 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 ZBTB49Q6ZSB9 765 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 SATL1Q86VE3 508 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 FBXO39Q8N4B4 442 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 TRIB2Q92519 343 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 IGSF8Q969P0 613 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 CIB1Q99828 191 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 ARPC5LQ9BPX5 153 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 SLC25A23Q9BV35 468 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 C1QTNF1Q9BXJ1 281 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 CATSPERZQ9NTU4 200 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 PTGDR2Q9Y5Y4 395 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 CCDC162PA2VCL2 907 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 BTN3A1O00481 513 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 PFDN6O15212 129 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 NRP2O60462 931 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 NPHS1O60500 1241 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 TIPRLO75663 272 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 SBK3P0C264 359 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 HGFP14210 728 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 PSMC3P17980 439 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 ARNTP27540 789 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 ARCN1P48444 511 aaKnown RBP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 KCNQ1P51787 676 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 C1QTNF8P60827 252 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 ECT2LQ008S8 904 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 CAPRIN1Q14444 709 aaKnown RBP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 VPS26BQ4G0F5 336 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 IL23RQ5VWK5 629 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 FAM45BPQ6NSW5 357 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 RNF111Q6ZNA4 994 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 KIAA0408Q6ZU52 694 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 NCCRP1Q6ZVX7 275 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 FRA10AC1Q70Z53 315 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 LIMS2Q7Z4I7 341 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 GLT6D1Q7Z4J2 308 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 KBTBD6Q86V97 674 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 TRPV1Q8NER1 839 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 DNAJB14Q8TBM8 379 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 FAM45AQ8TCE6 357 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 PTCD2Q8WV60 388 aaKnown RBP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 SKA2Q8WVK7 121 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 LRTOMTQ8WZ04 291 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 UPF1Q92900 1129 aaKnown RBP eCLIP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 BTN2A3PQ96KV6 586 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 HBEGFQ99075 208 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 TRIM8Q9BZR9 551 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 FAM192AQ9GZU8 254 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 CCSER2Q9H7U1 834 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 VPS45Q9NRW7 570 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 TLR6Q9Y2C9 796 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 Q9Y3F1 56 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 MTF2Q9Y483 593 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-201ENST00000401921 PCDHGC4Q9Y5F7 938 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 OTOFQ9HC10 1997 aa7.7□□□□□ -1.18
HDAC9-201ENST00000401921 BRCA1P38398 1863 aaKnown RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 LSM1O15116 133 aaKnown RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 STX7O15400 261 aaKnown RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 SEPT4O43236 478 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 GMNNO75496 209 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 CCND3P30281 292 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-201ENST00000401921 MAGEA12P43365 314 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 CDKN2DP55273 166 aa7.69□□□□□ -1.18
HDAC9-201ENST00000401921 PRKCZQ05513 592 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms