RNA–Protein interactions for RNA: ENST00000400100.5

SNRPN-205, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-205ENST00000400100 DTLQ9NZJ0 730 aa13.16□□□□□ -0.3
SNRPN-205ENST00000400100 NFS1Q9Y697 457 aa13.16□□□□□ -0.3
SNRPN-205ENST00000400100 APOL1O14791 398 aa13.15□□□□□ -0.3
SNRPN-205ENST00000400100 TM7SF2O76062 418 aa13.15□□□□□ -0.3
SNRPN-205ENST00000400100 KRT10P13645 584 aa13.15□□□□□ -0.3
SNRPN-205ENST00000400100 ARRB1P49407 418 aaPredicted RBP13.15□□□□□ -0.3
SNRPN-205ENST00000400100 AP1S1P61966 158 aa13.15□□□□□ -0.3
SNRPN-205ENST00000400100 FOXK2Q01167 660 aa13.15□□□□□ -0.3
SNRPN-205ENST00000400100 ELP6Q0PNE2 266 aa13.15□□□□□ -0.3
SNRPN-205ENST00000400100 SUZ12Q15022 739 aaKnown RBP13.15□□□□□ -0.3
SNRPN-205ENST00000400100 TRIP6Q15654 476 aaKnown RBP13.15□□□□□ -0.3
SNRPN-205ENST00000400100 ZNF423Q2M1K9 1284 aa13.15□□□□□ -0.3
SNRPN-205ENST00000400100 ZNF542PQ5EBM4 170 aa13.15□□□□□ -0.3
SNRPN-205ENST00000400100 BRAT1Q6PJG6 821 aa13.15□□□□□ -0.3
SNRPN-205ENST00000400100 MFSD7Q6UXD7 560 aa13.15□□□□□ -0.3
SNRPN-205ENST00000400100 GCNT7Q6ZNI0 430 aa13.15□□□□□ -0.3
SNRPN-205ENST00000400100 CCDC50Q8IVM0 306 aa13.15□□□□□ -0.3
SNRPN-205ENST00000400100 PLD5Q8N7P1 536 aa13.15□□□□□ -0.3
SNRPN-205ENST00000400100 C1QTNF2Q9BXJ5 285 aa13.15□□□□□ -0.3
SNRPN-205ENST00000400100 ZDHHC18Q9NUE0 388 aa13.15□□□□□ -0.3
SNRPN-205ENST00000400100 RBM22Q9NW64 420 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNRPN-205ENST00000400100 DDX56Q9NY93 547 aaKnown RBP13.15□□□□□ -0.3
SNRPN-205ENST00000400100 SAE1Q9UBE0 346 aaPredicted RBP13.15□□□□□ -0.3
SNRPN-205ENST00000400100 A0A1B0GTQ1 180 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 PCNX2A6NKB5 2137 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 KCNK1O00180 336 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 FPGTO14772 594 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 MATN3O15232 486 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 EIF3HO15372 352 aaKnown RBP eCLIP13.15□□□□□ -0.31
SNRPN-205ENST00000400100 MAGEC1O60732 1142 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 ITGAVP06756 1048 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 ADRB1P08588 477 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 CCNB1P14635 433 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 NR1D1P20393 614 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 COILP38432 576 aaPredicted RBP13.15□□□□□ -0.31
SNRPN-205ENST00000400100 GNGT1P63211 74 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 AP1B1Q10567 949 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 FOXC1Q12948 553 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 BNIP3Q12983 259 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 CCDC157Q569K6 752 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 LRRC38Q5VT99 294 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 KCTD16Q68DU8 428 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 TIGD7Q6NT04 549 aaPredicted RBP13.15□□□□□ -0.31
SNRPN-205ENST00000400100 IQCHQ86VS3 1027 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 SLCO2A1Q92959 643 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 BMFQ96LC9 184 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 NUDCD1Q96RS6 583 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 SEMA3CQ99985 751 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 MGME1Q9BQP7 344 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 CEP41Q9BYV8 373 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 TXLNGYQ9BZA5 131 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 SEPT10Q9P0V9 454 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 MTRF1LQ9UGC7 380 aaKnown RBP13.15□□□□□ -0.31
SNRPN-205ENST00000400100 PCOLCE2Q9UKZ9 415 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 ATP8A1Q9Y2Q0 1164 aa13.15□□□□□ -0.31
SNRPN-205ENST00000400100 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.14□□□□□ -0.31
SNRPN-205ENST00000400100 TRAFD1O14545 582 aaPredicted RBP13.14□□□□□ -0.31
SNRPN-205ENST00000400100 FLRT2O43155 660 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 PSTPIP1O43586 416 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 LZTS3O60299 673 aaPredicted RBP13.14□□□□□ -0.31
SNRPN-205ENST00000400100 DFNA5O60443 496 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 ZNF883P0CG24 379 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 MX2P20592 715 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 CCNCP24863 283 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 LIG3P49916 1009 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 CORO7P57737 925 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 POLR2LP62875 67 aaKnown RBP13.14□□□□□ -0.31
SNRPN-205ENST00000400100 DSC2Q02487 901 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 ZNF844Q08AG5 666 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 HNRNPDQ14103 355 aaKnown RBP13.14□□□□□ -0.31
SNRPN-205ENST00000400100 PTPRRQ15256 657 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 SHBQ15464 509 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 SIX1Q15475 284 aaPredicted RBP13.14□□□□□ -0.31
SNRPN-205ENST00000400100 AGBL2Q5U5Z8 902 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 DENND2CQ68D51 928 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 LRRC49Q8IUZ0 686 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 SLC22A18ASQ8N1D0 253 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 PNPLA1Q8N8W4 532 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 KLF6Q99612 283 aaPredicted RBP13.14□□□□□ -0.31
SNRPN-205ENST00000400100 POLR1EQ9GZS1 481 aaKnown RBP13.14□□□□□ -0.31
SNRPN-205ENST00000400100 SNX24Q9Y343 169 aa13.14□□□□□ -0.31
SNRPN-205ENST00000400100 TDRD6O60522 2096 aaKnown RBP13.14□□□□□ -0.31
SNRPN-205ENST00000400100 TSPAN11A1L157 253 aa13.13□□□□□ -0.31
SNRPN-205ENST00000400100 ECEL1O95672 775 aa13.13□□□□□ -0.31
SNRPN-205ENST00000400100 CPP00450 1065 aa13.13□□□□□ -0.31
SNRPN-205ENST00000400100 JCHAINP01591 159 aa13.13□□□□□ -0.31
SNRPN-205ENST00000400100 C6P13671 934 aa13.13□□□□□ -0.31
SNRPN-205ENST00000400100 CR2P20023 1033 aa13.13□□□□□ -0.31
SNRPN-205ENST00000400100 SPINK2P20155 84 aa13.13□□□□□ -0.31
SNRPN-205ENST00000400100 MMP12P39900 470 aa13.13□□□□□ -0.31
SNRPN-205ENST00000400100 CDKN2BP42772 138 aa13.13□□□□□ -0.31
SNRPN-205ENST00000400100 OVGP1Q12889 678 aa13.13□□□□□ -0.31
SNRPN-205ENST00000400100 TRAF2Q12933 501 aa13.13□□□□□ -0.31
SNRPN-205ENST00000400100 PDE1CQ14123 709 aaPredicted RBP13.13□□□□□ -0.31
SNRPN-205ENST00000400100 SLC9A4Q6AI14 798 aa13.13□□□□□ -0.31
SNRPN-205ENST00000400100 TTC27Q6P3X3 843 aa13.13□□□□□ -0.31
SNRPN-205ENST00000400100 SYDE1Q6ZW31 735 aaPredicted RBP13.13□□□□□ -0.31
SNRPN-205ENST00000400100 ABI3BPQ7Z7G0 1075 aa13.13□□□□□ -0.31
SNRPN-205ENST00000400100 CCDC13Q8IYE1 715 aa13.13□□□□□ -0.31
SNRPN-205ENST00000400100 HCAR2Q8TDS4 363 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms