RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PNPOQ9NVS9 261 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 TTC24A2A3L6 582 aaPredicted RBP13.78□□□□□ -0.2
VAPA-202ENST00000400000 A8MU76 341 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 ADH1CP00326 375 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 ATP5F1P24539 256 aaPredicted RBP13.78□□□□□ -0.2
VAPA-202ENST00000400000 RPL22P35268 128 aaKnown RBP13.78□□□□□ -0.2
VAPA-202ENST00000400000 SSR2P43308 183 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 ZNF155Q12901 538 aaPredicted RBP13.78□□□□□ -0.2
VAPA-202ENST00000400000 NOGQ13253 232 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 DGUOKQ16854 277 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 EEF1DP3Q658K8 133 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 PSMA8Q8TAA3 256 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 SLC35C1Q96A29 364 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 FCRL2Q96LA5 508 aaPredicted RBP13.78□□□□□ -0.2
VAPA-202ENST00000400000 TRIM39Q9HCM9 518 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 CNGB3Q9NQW8 809 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 BLOC1S4Q9NUP1 217 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 FRMPD4Q14CM0 1322 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 SIGLEC16A6NMB1 481 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 RFXANKO14593 260 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 MGRN1O60291 552 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 CSH1P0DML2 217 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 CSH2P0DML3 217 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 INO80DQ53TQ3 878 aaPredicted RBP13.77□□□□□ -0.2
VAPA-202ENST00000400000 PHYKPLQ8IUZ5 450 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 LMAN2LQ9H0V9 348 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 PHF11Q9UIL8 331 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 A8MUA0 341 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 FKBP6O75344 327 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 PGM3O95394 542 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 F7P08709 466 aaPredicted RBP13.77□□□□□ -0.2
VAPA-202ENST00000400000 MCEMP1Q8IX19 187 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 QRFPRQ96P65 431 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 TSSK3Q96PN8 268 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 C9orf16Q9BUW7 83 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 IKZF2Q9UKS7 526 aa13.77□□□□□ -0.2
VAPA-202ENST00000400000 FCF1Q9Y324 198 aaKnown RBP13.77□□□□□ -0.2
VAPA-202ENST00000400000 ATP4AP20648 1035 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 ZNF132P52740 706 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 TAS2R40P59535 323 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 MBTD1Q05BQ5 628 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 HYAL2Q12891 473 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 RRP1BQ14684 758 aaKnown RBP13.77□□□□□ -0.21
VAPA-202ENST00000400000 ULK3Q6PHR2 472 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 ADHFE1Q8IWW8 467 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 ZNF433Q8N7K0 673 aaPredicted RBP13.77□□□□□ -0.21
VAPA-202ENST00000400000 SAMHD1Q9Y3Z3 626 aaKnown RBP13.77□□□□□ -0.21
VAPA-202ENST00000400000 TIMM22Q9Y584 194 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 FGF10O15520 208 aaPredicted RBP13.77□□□□□ -0.21
VAPA-202ENST00000400000 TPD52L2O43399 206 aaKnown RBP13.77□□□□□ -0.21
VAPA-202ENST00000400000 TTPAP49638 278 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 GALK1P51570 392 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 UGT2B15P54855 530 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 TEX47Q8TBZ9 253 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 ZNF490Q9ULM2 529 aaPredicted RBP13.77□□□□□ -0.21
VAPA-202ENST00000400000 STARD13Q9Y3M8 1113 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 MADDQ8WXG6 1647 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 CDC42P60953 191 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 RAB10P61026 200 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 GK5Q6ZS86 529 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 PTCHD4Q6ZW05 846 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 C12orf56Q8IXR9 622 aa13.77□□□□□ -0.21
VAPA-202ENST00000400000 C12orf65Q9H3J6 166 aaKnown RBP13.77□□□□□ -0.21
VAPA-202ENST00000400000 TAF4O00268 1085 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 SNRPB2P08579 225 aaKnown RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 MAPTP10636 758 aaKnown RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 PSMD4P55036 377 aaKnown RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 POU5F1Q01860 360 aaKnown RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 TRMT5Q32P41 509 aaKnown RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 ZPBP2Q6X784 338 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 CERS5Q8N5B7 392 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 HJURPQ8NCD3 748 aaPredicted RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 LNX1Q8TBB1 728 aaPredicted RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 PPCDCQ96CD2 204 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 MYO19Q96H55 970 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 RASSF1Q9NS23 344 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 GMEB2Q9UKD1 530 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 ADAM28Q9UKQ2 775 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 GSTK1Q9Y2Q3 226 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 CHST15Q7LFX5 561 aaPredicted RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 GPR135Q8IZ08 494 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 ZCCHC9Q8N567 271 aaKnown RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 DHRS1Q96LJ7 313 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 PLEKHG4BQ96PX9 1271 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 MTMR9Q96QG7 549 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 ZFP37Q9Y6Q3 630 aaPredicted RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 RPLP2P05387 115 aaKnown RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 CHRM5P08912 532 aaPredicted RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 PPIDQ08752 370 aaKnown RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 ECM1Q16610 540 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 PRSS55Q6UWB4 352 aaPredicted RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 XAGE5Q8WWM1 108 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 ASTN2O75129 1339 aaPredicted RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 ZNF541Q9H0D2 1346 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 A0A0G2JN53 185 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 BTBD19C9JJ37 291 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 LIASO43766 372 aa13.76□□□□□ -0.21
VAPA-202ENST00000400000 SAGP10523 405 aaPredicted RBP13.76□□□□□ -0.21
VAPA-202ENST00000400000 ABATP80404 500 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms