RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 GCNT7Q6ZNI0 430 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TMC3Q7Z5M5 1100 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 NAT8LQ8N9F0 302 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TP53I13Q8NBR0 393 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TMEM145Q8NBT3 493 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ASB12Q8WXK4 309 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 SNX19Q92543 992 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 SLC6A18Q96N87 628 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 RUNDC3BQ96NL0 473 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 SLC17A9Q9BYT1 436 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 IRF2BPLQ9H1B7 796 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 MBNL1Q9NR56 388 aaKnown RBP12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 FEZ2Q9UHY8 353 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PILRBQ9UKJ0 227 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ZNF106Q9H2Y7 1883 aaKnown RBP12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 A0A1W2PR77 199 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 BHMG1C9JSJ3 638 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 H0Y8X5 98 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PSMD11O00231 422 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 DNALI1O14645 258 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TM7SF2O76062 418 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 SOD1P00441 154 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 WNT1P04628 370 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ZNF30P17039 623 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TPH1P17752 444 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ETV3P41162 512 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CLDN2P57739 230 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CERCAMQ5T4B2 595 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 LAIR1Q6GTX8 287 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 NAPEPLDQ6IQ20 393 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 LAYNQ6UX15 382 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 Q6ZVL8 140 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 SYDE1Q6ZW31 735 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CAND1Q86VP6 1230 aaKnown RBP12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 NDUFAF2Q8N183 169 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 AGGF1Q8N302 714 aaeCLIP12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 MMGT1Q8N4V1 131 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 BLOC1S5Q8TDH9 187 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 FUBP1Q96AE4 644 aaKnown RBP12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CENPTQ96BT3 561 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 DTD2Q96FN9 168 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 LOXL4Q96JB6 756 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 MYOCQ99972 504 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CARD6Q9BX69 1037 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TM9SF3Q9HD45 589 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ASIC3Q9UHC3 531 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 DMTF1Q9Y222 760 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 KCTD3Q9Y597 815 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TP53BP1Q12888 1972 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PCDH15Q96QU1 1955 aa12.41□□□□□ -0.42
HLA-DQB1-203ENST00000399082 GOLGA6CA6NDK9 693 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 GOLGA6BA6NDN3 693 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 POM121BA6NF01 834 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 FAM187AA6NFU0 413 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 E7EVH7 732 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 LDB2O43679 373 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 BUD23O43709 281 aaKnown RBP12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 SLC4A1P02730 911 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 GOLGA6DP0CG33 693 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 HNRNPA2B1P22626 353 aaKnown RBP12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 RPL21P46778 160 aaKnown RBP12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 BNC1Q01954 994 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 MTM1Q13496 603 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PTPRCAPQ14761 206 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 IRF4Q15306 451 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CCDC6Q16204 474 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 SETMARQ53H47 684 aaPredicted RBP12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PLA2G2CQ5R387 149 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 IZUMO3Q5VZ72 239 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 DENND2CQ68D51 928 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CCDC70Q6NSX1 233 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CYP2U1Q7Z449 544 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ZCCHC9Q8N567 271 aaKnown RBP12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PLA2G15Q8NCC3 412 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PIGKQ92643 395 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 SERAC1Q96JX3 654 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 BMFQ96LC9 184 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 LENG8Q96PV6 779 aaPredicted RBP12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 LRRC1Q9BTT6 524 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 MIR1-1HGQ9H1L0 117 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 SMOC1Q9H4F8 434 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ZFYVE1Q9HBF4 777 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 GOLGA6AQ9NYA3 693 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 GRHL1Q9NZI5 618 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 HACD3Q9P035 362 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 IL17CQ9P0M4 197 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TPX2Q9ULW0 747 aaKnown RBP12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ARL5AQ9Y689 179 aa12.4□□□□□ -0.42
HLA-DQB1-203ENST00000399082 BPTFQ12830 3046 aa12.4□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CTAGE15A4D2H0 777 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PATE3B3GLJ2 98 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PRAMEF26H0Y7S4 382 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 K7ESM1 405 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 GAPDHSO14556 408 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 LZTS3O60299 673 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SEC31AO94979 1220 aaKnown RBP12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CTAGE8P0CG41 777 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 BPIP17213 487 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 NFKBIAP25963 317 aa12.39□□□□□ -0.43
HLA-DQB1-203ENST00000399082 HMGCLP35914 325 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms