RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 PIM3Q86V86 326 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 FUNDC1Q8IVP5 155 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 OR6P1Q8NGX9 317 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 SH3RF2Q8TEC5 729 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 C19orf60Q96EN9 201 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 C3orf30Q96M34 536 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 KLHL5Q96PQ7 755 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 FNIP2Q9P278 1114 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 CNOT6Q9ULM6 557 aaKnown RBP25.62■■□□□ 1.69
COL13A1-203ENST00000398969 SLC26A3P40879 764 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 SLC7A2P52569 658 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 DSC2Q02487 901 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 UNC50Q53HI1 259 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 CCSAPQ6IQ19 270 aaPredicted RBP25.62■■□□□ 1.69
COL13A1-203ENST00000398969 CARM1Q86X55 608 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 UMODL1-AS1Q8N2C9 162 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 HDAC10Q969S8 669 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 PBXIP1Q96AQ6 731 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 SLC29A1Q99808 456 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 SLC39A3Q9BRY0 314 aa25.62■■□□□ 1.69
COL13A1-203ENST00000398969 MARCH4Q9P2E8 410 aaPredicted RBP25.62■■□□□ 1.69
COL13A1-203ENST00000398969 A0A1W2PQH9 124 aa25.61■■□□□ 1.69
COL13A1-203ENST00000398969 ALDOCP09972 364 aaKnown RBP25.61■■□□□ 1.69
COL13A1-203ENST00000398969 TSPY1Q01534 308 aa25.61■■□□□ 1.69
COL13A1-203ENST00000398969 ADRM1Q16186 407 aa25.61■■□□□ 1.69
COL13A1-203ENST00000398969 UGT3A2Q3SY77 523 aa25.61■■□□□ 1.69
COL13A1-203ENST00000398969 TFAP2DQ7Z6R9 452 aa25.61■■□□□ 1.69
COL13A1-203ENST00000398969 SPATA2LQ8IUW3 424 aaPredicted RBP25.61■■□□□ 1.69
COL13A1-203ENST00000398969 RSPH1Q8WYR4 309 aa25.61■■□□□ 1.69
COL13A1-203ENST00000398969 HMCESQ96FZ2 354 aa25.61■■□□□ 1.69
COL13A1-203ENST00000398969 C1orf74Q96LT6 269 aa25.61■■□□□ 1.69
COL13A1-203ENST00000398969 NFKB2Q00653 900 aa25.61■■□□□ 1.69
COL13A1-203ENST00000398969 MGAT3Q09327 533 aa25.61■■□□□ 1.69
COL13A1-203ENST00000398969 CYTH1Q15438 398 aa25.61■■□□□ 1.69
COL13A1-203ENST00000398969 MARC1Q5VT66 337 aa25.61■■□□□ 1.69
COL13A1-203ENST00000398969 THEM5Q8N1Q8 247 aa25.61■■□□□ 1.69
COL13A1-203ENST00000398969 PTERQ96BW5 349 aa25.61■■□□□ 1.69
COL13A1-203ENST00000398969 SERPINB11Q96P15 392 aa25.61■■□□□ 1.69
COL13A1-203ENST00000398969 AGO3Q9H9G7 860 aaKnown RBP25.61■■□□□ 1.69
COL13A1-203ENST00000398969 ARHGAP10A1A4S6 786 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 OR51F1A6NGY5 319 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 GPX3P22352 226 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 STX1BP61266 288 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 HERVK_113P63132 956 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 DHFR2Q86XF0 187 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 ROPN1LQ96C74 230 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 CIB1Q99828 191 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 EFHD1Q9BUP0 239 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 ERVK-6Q9BXR3 956 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 NOL11Q9H8H0 719 aaKnown RBP25.6■■□□□ 1.69
COL13A1-203ENST00000398969 GMPR2Q9P2T1 348 aaKnown RBP25.6■■□□□ 1.69
COL13A1-203ENST00000398969 ATXN10Q9UBB4 475 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 ITGB1P05556 798 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 HAPLN1P10915 354 aaPredicted RBP25.6■■□□□ 1.69
COL13A1-203ENST00000398969 NDST2P52849 883 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 PRAMEP78395 509 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 RETREG3Q86VR2 466 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 TSPAN14Q8NG11 270 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 FATE1Q969F0 183 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 PABPC5Q96DU9 382 aaKnown RBP25.6■■□□□ 1.69
COL13A1-203ENST00000398969 DNAJC1Q96KC8 554 aaKnown RBP25.6■■□□□ 1.69
COL13A1-203ENST00000398969 RGS18Q9NS28 235 aa25.6■■□□□ 1.69
COL13A1-203ENST00000398969 TTC24A2A3L6 582 aaPredicted RBP25.59■■□□□ 1.69
COL13A1-203ENST00000398969 RPLP2P05387 115 aaKnown RBP25.59■■□□□ 1.69
COL13A1-203ENST00000398969 PITRM1Q5JRX3 1037 aa25.59■■□□□ 1.69
COL13A1-203ENST00000398969 SIRPB2Q5JXA9 342 aa25.59■■□□□ 1.69
COL13A1-203ENST00000398969 CLYBLQ8N0X4 340 aa25.59■■□□□ 1.69
COL13A1-203ENST00000398969 MYO1HQ8N1T3 1032 aa25.59■■□□□ 1.69
COL13A1-203ENST00000398969 CAPNS2Q96L46 248 aa25.59■■□□□ 1.69
COL13A1-203ENST00000398969 AKTIPQ9H8T0 292 aa25.59■■□□□ 1.69
COL13A1-203ENST00000398969 POLR3BQ9NW08 1133 aaPredicted RBP25.59■■□□□ 1.69
COL13A1-203ENST00000398969 CRYL1Q9Y2S2 319 aa25.59■■□□□ 1.69
COL13A1-203ENST00000398969 KCTD3Q9Y597 815 aa25.59■■□□□ 1.69
COL13A1-203ENST00000398969 ZNF839A8K0R7 811 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 CST5P28325 142 aaPredicted RBP25.58■■□□□ 1.69
COL13A1-203ENST00000398969 THPOP40225 353 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 CDH13P55290 713 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 PABPC1LQ4VXU2 614 aaKnown RBP25.58■■□□□ 1.69
COL13A1-203ENST00000398969 TMEM259Q4ZIN3 620 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 IRAK1BP1Q5VVH5 260 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 ZNF683Q8IZ20 524 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 ALDH16A1Q8IZ83 802 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 OR52K2Q8NGK3 314 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 TMEM79Q9BSE2 394 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 HAUS8Q9BT25 410 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 PRDM5Q9NQX1 630 aaPredicted RBP25.58■■□□□ 1.69
COL13A1-203ENST00000398969 DNAJC15Q9Y5T4 150 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 MYO16Q9Y6X6 1858 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 PDLIM1O00151 329 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 TIPRLO75663 272 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 H6PDO95479 791 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 HSPA8P11142 646 aaKnown RBP25.58■■□□□ 1.69
COL13A1-203ENST00000398969 SH3BP2P78314 561 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 PCYOX1LQ8NBM8 494 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 OR2T34Q8NGX1 318 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 OR2T3Q8NH03 318 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 EXT2Q93063 718 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 SP110Q9HB58 689 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 CEPT1Q9Y6K0 416 aa25.58■■□□□ 1.69
COL13A1-203ENST00000398969 TANC1Q9C0D5 1861 aa25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms