RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 C1QTNF1Q9BXJ1 281 aa9.91□□□□□ -0.82
PTCHD4-202ENST00000398738 SIK2Q9H0K1 926 aa9.91□□□□□ -0.82
PTCHD4-202ENST00000398738 ZNHIT2Q9UHR6 403 aa9.91□□□□□ -0.82
PTCHD4-202ENST00000398738 BTRCQ9Y297 605 aa9.91□□□□□ -0.82
PTCHD4-202ENST00000398738 SLX4Q8IY92 1834 aa9.91□□□□□ -0.82
PTCHD4-202ENST00000398738 PTPRFP10586 1907 aa9.91□□□□□ -0.82
PTCHD4-202ENST00000398738 A0A0J9YYE9 177 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 KRBA1A5PL33 1030 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 LRRC14BA6NHZ5 514 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 A6NJY4 79 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 DFFAO00273 331 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 ANGPT2O15123 496 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 TRIM24O15164 1050 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 BAIAP3O94812 1187 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 ARIH2O95376 493 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 IL7RP16871 459 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 ZNF12P17014 697 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 ARF4P18085 180 aaPredicted RBP9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 NKX2-5P52952 324 aaPredicted RBP9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 TPI1P60174 286 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 RAB10P61026 200 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 FPGSQ05932 587 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 INPP5AQ14642 412 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 ZNF789Q5FWF6 425 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 RWDD4Q6NW29 188 aaKnown RBP9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 HFE2Q6ZVN8 426 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 TNIP2Q8NFZ5 429 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 C1orf216Q8TAB5 229 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 RSPH1Q8WYR4 309 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 TMEM74Q96NL1 305 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 MUS81Q96NY9 551 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 IL22Q9GZX6 179 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 RHOJQ9H4E5 214 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 SETD4Q9NVD3 440 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 GPRC5DQ9NZD1 345 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 SYNCRIPO60506 623 aaKnown RBP9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 PARNO95453 639 aaKnown RBP9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 APOA4P06727 396 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 CD68P34810 354 aaPredicted RBP9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 ARL1P40616 181 aaPredicted RBP9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 PTPN9P43378 593 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 GJA8P48165 433 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 MBTD1Q05BQ5 628 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 RFTN1Q14699 578 aaPredicted RBP9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 HERC3Q15034 1050 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 MAPRE2Q15555 327 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 SAPCD2Q86UD0 394 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 ALDH16A1Q8IZ83 802 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 RNF34Q969K3 372 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 SPATA33Q96N06 139 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 GPR22Q99680 433 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 SLC25A23Q9BV35 468 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 C2orf40Q9H1Z8 148 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 ALG9Q9H6U8 611 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 TBC1D13Q9NVG8 400 aa9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 IPO11Q9UI26 975 aaKnown RBP9.9□□□□□ -0.82
PTCHD4-202ENST00000398738 NUP205Q92621 2012 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 HACD1B0YJ81 288 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 MEN1O00255 615 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 E2F6O75461 281 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 ZNF24P17028 368 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 JAK1P23458 1154 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 OPRL1P41146 370 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 CHRNA4P43681 627 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 GHRHRQ02643 423 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 MTA1Q13330 715 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 SQLEQ14534 574 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 POLD3Q15054 466 aaPredicted RBP9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 DHRS4L2Q6PKH6 230 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 TBPL2Q6SJ96 375 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 CLEC4FQ8N1N0 589 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 NPWQ8N729 165 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 SMG8Q8ND04 991 aaKnown RBP9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 EDEM1Q92611 657 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 FZD8Q9H461 694 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 MRPL40Q9NQ50 206 aaKnown RBP9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 FZD10Q9ULW2 581 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 TRAF6Q9Y4K3 522 aa9.9□□□□□ -0.83
PTCHD4-202ENST00000398738 DNAH12Q6ZR08 3092 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 A6NL46 340 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 AGRPO00253 132 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 KPNA6O60684 536 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 SIX3O95343 332 aaPredicted RBP9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 ALBP02768 609 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 PTPRAP18433 802 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 MAGEA12P43365 314 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 ECT2LQ008S8 904 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 DMPKQ09013 629 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 MOGQ16653 247 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 PLA2G4EQ3MJ16 856 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 DCBLD1Q8N8Z6 715 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 Q8N9G6 341 aaPredicted RBP9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 OR52K2Q8NGK3 314 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 TUBGCP3Q96CW5 907 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 KCNA7Q96RP8 456 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 GOLGA2P5Q9HBQ8 144 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 PIGVQ9NUD9 493 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 SNTG2Q9NY99 539 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 UTP6Q9NYH9 597 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms