RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 NAT6Q93015 286 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 FAF2Q96CS3 445 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 DEPDC7Q96QD5 511 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 SEMA3CQ99985 751 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 POLR1EQ9GZS1 481 aaKnown RBP13.44□□□□□ -0.26
VCX3A-202ENST00000398729 SPTLC3Q9NUV7 552 aa13.44□□□□□ -0.26
VCX3A-202ENST00000398729 TEX51A0A1B0GUA7 166 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 PDE2AO00408 941 aaPredicted RBP13.43□□□□□ -0.26
VCX3A-202ENST00000398729 MATN3O15232 486 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 BRINP1O60477 761 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 HEXIM1O94992 359 aaKnown RBP13.43□□□□□ -0.26
VCX3A-202ENST00000398729 MAP3K6O95382 1288 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 HOXC4P09017 264 aaPredicted RBP13.43□□□□□ -0.26
VCX3A-202ENST00000398729 KRT10P13645 584 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 MX2P20592 715 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 CES1P23141 567 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 CCNCP24863 283 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 TRIM23P36406 574 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 ARHGAP25P42331 645 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 KIAA1024LP59773 190 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 CFHR1Q03591 330 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 CCDC173Q0VFZ6 552 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 ARHGEF7Q14155 803 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 CNGA3Q16281 694 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 DENND2CQ68D51 928 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 PNCKQ6P2M8 343 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 USP45Q70EL2 814 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 RHOT2Q8IXI1 618 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 SLC35F3Q8IY50 421 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 TPCN2Q8NHX9 752 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 MAML1Q92585 1016 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 FATE1Q969F0 183 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 FUBP1Q96AE4 644 aaKnown RBP13.43□□□□□ -0.26
VCX3A-202ENST00000398729 NUS1Q96E22 293 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 COQ10AQ96MF6 247 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 TSGA13Q96PP4 275 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 ANP32EQ9BTT0 268 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 WDR26Q9H7D7 661 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 AMACRQ9UHK6 382 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 DGKBQ9Y6T7 804 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 LRP4O75096 1905 aa13.43□□□□□ -0.26
VCX3A-202ENST00000398729 NPIPB15A6NHN6 443 aaPredicted RBP13.42□□□□□ -0.26
VCX3A-202ENST00000398729 AKR1B15C9JRZ8 316 aaPredicted RBP13.42□□□□□ -0.26
VCX3A-202ENST00000398729 PSMD11O00231 422 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 TNFRSF10CO14798 259 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 CELA2BP08218 269 aaPredicted RBP13.42□□□□□ -0.26
VCX3A-202ENST00000398729 CCNB1P14635 433 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 GM2AP17900 193 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 TGM2P21980 687 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 KDELR1P24390 212 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 TCEA2Q15560 299 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 ALG1LQ6GMV1 187 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 SPACA3Q8IXA5 215 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 PQLC3Q8N755 202 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 OR56A4Q8NGH8 313 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 RAPGEF5Q92565 580 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 HDAC11Q96DB2 347 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 SCRN2Q96FV2 425 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 ZNF830Q96NB3 372 aaPredicted RBP13.42□□□□□ -0.26
VCX3A-202ENST00000398729 RNF157Q96PX1 679 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 RBM15Q96T37 977 aaKnown RBP eCLIP13.42□□□□□ -0.26
VCX3A-202ENST00000398729 RBM22Q9NW64 420 aaKnown RBP eCLIP13.42□□□□□ -0.26
VCX3A-202ENST00000398729 PADI4Q9UM07 663 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 TTLL3Q9Y4R7 772 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 COL12A1Q99715 3063 aa13.42□□□□□ -0.26
VCX3A-202ENST00000398729 LRRD1A4D1F6 860 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 TMEM202A6NGA9 273 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 ZNF487B1APH4 448 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 CSO75390 466 aaKnown RBP13.41□□□□□ -0.26
VCX3A-202ENST00000398729 MTA2O94776 668 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 MYCLP1P12525 358 aaPredicted RBP13.41□□□□□ -0.26
VCX3A-202ENST00000398729 CTPS1P17812 591 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 CA4P22748 312 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 LHCGRP22888 699 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 EPHB1P54762 984 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 DSC2Q02487 901 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 GBE1Q04446 702 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 TBC1D25Q3MII6 688 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 ODF2Q5BJF6 829 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 PERM1Q5SV97 790 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 HSD11B1LQ7Z5J1 315 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 VSIG1Q86XK7 387 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 ARL10Q8N8L6 244 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 CCNYQ8ND76 341 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 WDR48Q8TAF3 677 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.41□□□□□ -0.26
VCX3A-202ENST00000398729 PIH1D2Q8WWB5 315 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 OR1E3Q8WZA6 343 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 GRAMD1AQ96CP6 724 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 DTD2Q96FN9 168 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 PDXPQ96GD0 296 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 MCCC1Q96RQ3 725 aaPredicted RBP13.41□□□□□ -0.26
VCX3A-202ENST00000398729 LGR4Q9BXB1 951 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 FGF22Q9HCT0 170 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 PHPT1Q9NRX4 125 aaPredicted RBP13.41□□□□□ -0.26
VCX3A-202ENST00000398729 DTLQ9NZJ0 730 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 SIRPGQ9P1W8 387 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 GULP1Q9UBP9 304 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 MOSPD1Q9UJG1 213 aa13.41□□□□□ -0.26
VCX3A-202ENST00000398729 INTUQ9ULD6 942 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms