RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 H3BN98 237 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 FAM189A1O60320 539 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 OTCP00480 354 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 POMCP01189 267 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 PIGRP01833 764 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 PTPN3P26045 913 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 TTPAP49638 278 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 ACSM2AQ08AH3 577 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 CCL15Q16663 113 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 GJC2Q5T442 439 aaPredicted RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 GPR158Q5T848 1215 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 ACSM2BQ68CK6 577 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 ESRP1Q6NXG1 681 aaKnown RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 EPGNQ6UW88 154 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 CDHR3Q6ZTQ4 885 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 RALGPS2Q86X27 583 aaPredicted RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 RAB42Q8N4Z0 105 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 HEXDCQ8WVB3 486 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 TADA1Q96BN2 335 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 REXO5Q96IC2 774 aaKnown RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 SIGLEC10Q96LC7 697 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 TLR8Q9NR97 1041 aaKnown RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 UBA2Q9UBT2 640 aaPredicted RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 IKZF3Q9UKT9 509 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 NRXN3Q9Y4C0 1643 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 KCPQ6ZWJ8 1503 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 EI24O14681 340 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 FFAR3O14843 346 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 GPR42O15529 346 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 BCAS2O75934 225 aaPredicted RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 ABCB1P08183 1280 aaPredicted RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 GSTM1P09488 218 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 PIRTP0C851 137 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 UGT1A6P19224 532 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 UGT1A1P22309 533 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 UGT1A4P22310 534 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 L1CAMP32004 1257 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 UGT1A3P35503 534 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 UGT1A5P35504 534 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 TUBA4AP68366 448 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 ACAP2Q15057 778 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 CTXN3Q4LDR2 81 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 ANKS3Q6ZW76 656 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 TMEM126BQ8IUX1 230 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 SYT12Q8IV01 421 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 ELMOD1Q8N336 334 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 PACRGLQ8N7B6 248 aa11.07□□□□□ -0.64
HPS4-202ENST00000398145 RBM4BQ9BQ04 359 aaKnown RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 RBM4Q9BWF3 364 aaKnown RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 RBMX2Q9Y388 322 aaKnown RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 COPG1Q9Y678 874 aaKnown RBP11.07□□□□□ -0.64
HPS4-202ENST00000398145 NALCNQ8IZF0 1738 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 RGPD8O14715 1765 aaPredicted RBP11.06□□□□□ -0.64
HPS4-202ENST00000398145 TOP3BO95985 862 aaKnown RBP11.06□□□□□ -0.64
HPS4-202ENST00000398145 POLR2JP52435 117 aaKnown RBP11.06□□□□□ -0.64
HPS4-202ENST00000398145 ITGA1P56199 1179 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 TAB1Q15750 504 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 PHKG1Q16816 387 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 DGKKQ5KSL6 1271 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 FAM182AQ5T1J6 154 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 TMEM214Q6NUQ4 689 aaKnown RBP11.06□□□□□ -0.64
HPS4-202ENST00000398145 DCLRE1AQ6PJP8 1040 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 UTS2BQ765I0 119 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 ADAMTSL2Q86TH1 951 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 DENND6AQ8IWF6 608 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 TOP1MTQ969P6 601 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 TAMM41Q96BW9 452 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 FCRL2Q96LA5 508 aaPredicted RBP11.06□□□□□ -0.64
HPS4-202ENST00000398145 CCDC106Q9BWC9 280 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 ARMC7Q9H6L4 198 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.06□□□□□ -0.64
HPS4-202ENST00000398145 PDE10AQ9Y233 779 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 NR2E3Q9Y5X4 410 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 GPC6Q9Y625 555 aaPredicted RBP11.06□□□□□ -0.64
HPS4-202ENST00000398145 A0A088AWK7 358 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 ANGPTL1O95841 491 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 CNPP09543 421 aaKnown RBP11.06□□□□□ -0.64
HPS4-202ENST00000398145 ALOX15P16050 662 aaPredicted RBP11.06□□□□□ -0.64
HPS4-202ENST00000398145 EPB42P16452 691 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 C4BPBP20851 252 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 THPOP40225 353 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 SLC26A3P40879 764 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 IRF9Q00978 393 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 HIPK1Q86Z02 1210 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 UTP4Q969X6 686 aaKnown RBP11.06□□□□□ -0.64
HPS4-202ENST00000398145 PRRG3Q9BZD7 231 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 LIN28AQ9H9Z2 209 aaKnown RBP11.06□□□□□ -0.64
HPS4-202ENST00000398145 ARL15Q9NXU5 204 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 SUCOQ9UBS9 1254 aaKnown RBP11.06□□□□□ -0.64
HPS4-202ENST00000398145 DERAQ9Y315 318 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 PPP2R3BQ9Y5P8 575 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 MYL12BO14950 172 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 NTRK1P04629 796 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 MTA1Q13330 715 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 DEPDC4Q8N2C3 294 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 ST13P5Q8NFI4 369 aaPredicted RBP11.06□□□□□ -0.64
HPS4-202ENST00000398145 OR4L1Q8NH43 312 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 SPATA22Q8NHS9 363 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 NDRG1Q92597 394 aaKnown RBP11.06□□□□□ -0.64
HPS4-202ENST00000398145 SLC47A1Q96FL8 570 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms