RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 STK40Q8N2I9 435 aa19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 C2CD4AQ8NCU7 369 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 GABPB2Q8TAK5 448 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 SCG3Q8WXD2 468 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 MSANTD3Q96H12 275 aa19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 PRSS16Q9NQE7 514 aa19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 HEBP1Q9NRV9 189 aa19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 POLR3BQ9NW08 1133 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 STON1Q9Y6Q2 735 aa19.5■□□□□ 0.71
PDLIM2-205ENST00000397761 CCDC162PA2VCL2 907 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 SHISA7A6NL88 538 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 FOXO6A8MYZ6 492 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 GOLGA8TH3BQL2 631 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 BUD23O43709 281 aaKnown RBP19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 SRFP11831 508 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 KRT15P19012 456 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 HADHAP40939 763 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 PRAMEP78395 509 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 THOC5Q13769 683 aaKnown RBP19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 FSTL4Q6MZW2 842 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 KDM7AQ6ZMT4 941 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 TIFABQ6ZNK6 161 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 SH2D5Q6ZV89 423 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 TAOK1Q7L7X3 1001 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 STRA8Q7Z7C7 330 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 ZNF513Q8N8E2 541 aaPredicted RBP19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 FAM76AQ8TAV0 307 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 GPR63Q9BZJ6 419 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 ZFYVE1Q9HBF4 777 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 CACNA2D2Q9NY47 1150 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 SARDHQ9UL12 918 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 NCOR1O75376 2440 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 PIKFYVEQ9Y2I7 2098 aa19.49■□□□□ 0.71
PDLIM2-205ENST00000397761 C1orf232A0A0U1RR37 186 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 UPK3BL1B0FP48 263 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 TRIM49D1C9J1S8 452 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 UPK3BL2E5RIL1 263 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 CCL22O00626 93 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 STX7O15400 261 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 TIMP2P16035 220 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 DRD1P21728 446 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 ITGB7P26010 798 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 GABRB3P28472 473 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 SLC1A2P43004 574 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 LIMK2P53671 638 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 CAMK2GQ13555 558 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 TDGQ13569 410 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 SMAD1Q15797 465 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 ZNF470Q6ECI4 717 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 CRTC1Q6UUV9 634 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 CILP2Q8IUL8 1156 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 SRRM1Q8IYB3 904 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 CBARPQ8N350 705 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 PAF1Q8N7H5 531 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 OR6P1Q8NGX9 317 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 ISL2Q96A47 359 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 SUDS3Q9H7L9 328 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 SSU72Q9NP77 194 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 PRDM6Q9NQX0 595 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 TXNDC16Q9P2K2 825 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 FBXO5Q9UKT4 447 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 A0A1W2PPM1 405 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 C16orf96A6NNT2 1141 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 GOT2P00505 430 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 EPHX1P07099 455 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 ITGA2BP08514 1039 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 IL9P15248 144 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 CREB1P16220 341 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 OGNP20774 298 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 LHCGRP22888 699 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 SPRP35270 261 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 LEPRP48357 1165 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 PPP2R2AP63151 447 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 AFTPHQ6ULP2 937 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 DSG4Q86SJ6 1040 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 ZC3HC1Q86WB0 502 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 DENND6AQ8IWF6 608 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 OR4L1Q8NH43 312 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 PIP4K2CQ8TBX8 421 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 GABRG3Q99928 467 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 RHOJQ9H4E5 214 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 THEGQ9P2T0 379 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 B4GALT6Q9UBX8 382 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 PKP3Q9Y446 797 aa19.48■□□□□ 0.71
PDLIM2-205ENST00000397761 A0A0U1RQS6 177 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 NARSO43776 548 aaKnown RBP19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 RFPL1O75677 317 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 CLDN7O95471 211 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 EGFP01133 1207 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 AHSGP02765 367 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 C7P10643 843 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 ZNF30P17039 623 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 NFKBIAP25963 317 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 FOXN2P32314 431 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 SUOXP51687 545 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 PTPN5P54829 565 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 TMPRSS15P98073 1019 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 XIAPP98170 497 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 SLC18A2Q05940 514 aa19.47■□□□□ 0.71
PDLIM2-205ENST00000397761 ILF2Q12905 390 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms