RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TRMT6Q9UJA5 497 aaKnown RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 SLC30A1Q9Y6M5 507 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 E7ENX8 843 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 MUSKO15146 869 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 TYMPP19971 482 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 KCNC1P48547 511 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 INHBEP58166 350 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 PLOD1Q02809 727 aaPredicted RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 SULT2A1Q06520 285 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 PDK3Q15120 406 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 C6orf10Q5SRN2 563 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 ATXN7L2Q5T6C5 722 aaPredicted RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 PTRHD1Q6GMV3 140 aaKnown RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 DNAJC14Q6Y2X3 702 aaPredicted RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 LIMS2Q7Z4I7 341 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 SETD3Q86TU7 594 aaPredicted RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 CDYL2Q8N8U2 506 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 RDH11Q8TC12 318 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 RPL10LQ96L21 214 aaKnown RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 ACOX2Q99424 681 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 NOL6Q9H6R4 1146 aaKnown RBP10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 TNFRSF12AQ9NP84 129 aa10.45□□□□□ -0.74
CPSF1P1-201ENST00000397477 ANK1P16157 1881 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 ZNF195O14628 629 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 ADAM12O43184 909 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 NIPSNAP2O75323 286 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 SBK3P0C264 359 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 CORO1AP31146 461 aaKnown RBP10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 RHOAP61586 193 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 CDH18Q13634 790 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 LSMEM2Q8N112 164 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 KDM1BQ8NB78 822 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 IMP4Q96G21 291 aaKnown RBP10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 FKBPLQ9UIM3 349 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 CROTQ9UKG9 612 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 SCML2Q9UQR0 700 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 MTMR11A4FU01 709 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 CDC7O00311 574 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 SDHDO14521 159 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 TNFRSF10BO14763 440 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 PIP5K1BO14986 540 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 MAP3K13O43283 966 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 OR1I1O60431 355 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 ADAMTS4O75173 837 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 ZNF189O75820 626 aaPredicted RBP10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 CHEK2O96017 543 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 SNRPB2P08579 225 aaKnown RBP10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 PSMC3P17980 439 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 GKP32189 559 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 GNA12Q03113 381 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 RAD51Q06609 339 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 METTL21CQ5VZV1 264 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 CLEC14AQ86T13 490 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 LCA5Q86VQ0 697 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 DCUN1D1Q96GG9 259 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 SEPHS2Q99611 448 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 CENPKQ9BS16 269 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 TAS2R13Q9NYV9 303 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 TRPM5Q9NZQ8 1165 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 FCF1Q9Y324 198 aaKnown RBP10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 TYW5A2RUC4 315 aaKnown RBP10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 TMEM88BA6NKF7 163 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 H3BMM5 538 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 TIPRLO75663 272 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 RTN3O95197 1032 aaPredicted RBP10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 CRTAMO95727 393 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 TRIP4Q15650 581 aaPredicted RBP10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 MTX3Q5HYI7 312 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 SLC30A9Q6PML9 568 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 CD300LGQ6UXG3 332 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 LRRC8DQ7L1W4 858 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 TRIML2Q8N7C3 387 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 SIDT2Q8NBJ9 832 aaKnown RBP10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 OR13J1Q8NGT2 312 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 DDI1Q8WTU0 396 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 LPGAT1Q92604 370 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 VPS33AQ96AX1 596 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 CCDC126Q96EE4 140 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 ANKRD27Q96NW4 1050 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 CIB1Q99828 191 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 TTPALQ9BTX7 342 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 C1QTNF1Q9BXJ1 281 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 C1orf21Q9H246 121 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 VPS45Q9NRW7 570 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 SEPT3Q9UH03 358 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 SUN2Q9UH99 717 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 DNMT3LQ9UJW3 386 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 AGO1Q9UL18 857 aaKnown RBP10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 WDR90Q96KV7 1748 aa10.44□□□□□ -0.74
CPSF1P1-201ENST00000397477 OTOFQ9HC10 1997 aa10.43□□□□□ -0.74
CPSF1P1-201ENST00000397477 CYP11A1P05108 521 aa10.43□□□□□ -0.74
CPSF1P1-201ENST00000397477 ATP5BP06576 529 aaKnown RBP10.43□□□□□ -0.74
CPSF1P1-201ENST00000397477 CKMP06732 381 aa10.43□□□□□ -0.74
CPSF1P1-201ENST00000397477 MC4RP32245 332 aa10.43□□□□□ -0.74
CPSF1P1-201ENST00000397477 MAPRE2Q15555 327 aa10.43□□□□□ -0.74
CPSF1P1-201ENST00000397477 LRRC73Q5JTD7 316 aa10.43□□□□□ -0.74
CPSF1P1-201ENST00000397477 RSPO2Q6UXX9 243 aaPredicted RBP10.43□□□□□ -0.74
CPSF1P1-201ENST00000397477 SLC22A9Q8IVM8 553 aa10.43□□□□□ -0.74
CPSF1P1-201ENST00000397477 PGBD5Q8N414 524 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms