RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 STC1P52823 247 aa23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 PTSQ03393 145 aa23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 DHX9Q08211 1270 aaKnown RBP23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 MSS51Q4VC12 460 aa23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 PCID2Q5JVF3 399 aa23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 KIAA1161Q6NSJ0 714 aa23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 NEK5Q6P3R8 708 aa23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 CASC4Q6P4E1 433 aa23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 TMC3Q7Z5M5 1100 aa23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 MPP5Q8N3R9 675 aa23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 RUBCNQ92622 972 aa23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 RANBP9Q96S59 729 aa23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 MTRF1LQ9UGC7 380 aaKnown RBP23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 ZFR2Q9UPR6 939 aaKnown RBP23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 MUC6Q6W4X9 2439 aa23.61■■□□□ 1.37
TSPAN4-203ENST00000397397 HEATR9A2RTY3 570 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 IGLON5A6NGN9 336 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 GOLGA8CPA6NN73 597 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 MAP3K13O43283 966 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 BUD23O43709 281 aaKnown RBP23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 LZTS3O60299 673 aaPredicted RBP23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 BANF1O75531 89 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 C1SP09871 688 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 SP9P0CG40 484 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 C6P13671 934 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 PPP2CBP62714 309 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 RPS21P63220 83 aaKnown RBP23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 PPP2CAP67775 309 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 LAMB3Q13751 1172 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 ACOX1Q15067 660 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 ZNF528Q3MIS6 628 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 SEL1L3Q68CR1 1132 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 SLC36A4Q6YBV0 504 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 CENPUQ71F23 418 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 HSD11B1LQ7Z5J1 315 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 HORMAD1Q86X24 394 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 SIGLEC10Q96LC7 697 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 FOXP3Q9BZS1 431 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 C6orf106Q9H6K1 298 aaPredicted RBP23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 SAMD15Q9P1V8 674 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 NFU1Q9UMS0 254 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 COQ6Q9Y2Z9 468 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 TCAF1Q9Y4C2 921 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 KCTD3Q9Y597 815 aa23.6■■□□□ 1.37
TSPAN4-203ENST00000397397 PSMD11O00231 422 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 LDB2O43679 373 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 LPOP22079 712 aaPredicted RBP23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 ECHS1P30084 290 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 PDIA2Q13087 525 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 CCDC25Q86WR0 208 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 AGGF1Q8N302 714 aaeCLIP23.59■■□□□ 1.371e-7■■■■□ 23.7
TSPAN4-203ENST00000397397 EID2BQ96D98 161 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 PHOX2BQ99453 314 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 FAM86C1Q9NVL1 165 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 PKD2L2Q9NZM6 624 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 MAD1L1Q9Y6D9 718 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 TRPM6Q9BX84 2022 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 CCDC78A2IDD5 438 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 STX7O15400 261 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 TM7SF2O76062 418 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 BCKDHBP21953 392 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 MAT2AP31153 395 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 HMGCLP35914 325 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 PDE1BQ01064 536 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 RPL6Q02878 288 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 HP1BP3Q5SSJ5 553 aaPredicted RBP23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 KIAA0895LQ68EN5 471 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 TRIM69Q86WT6 500 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 CBARPQ8N350 705 aaPredicted RBP23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 NELL1Q92832 810 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 KLK6Q92876 244 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 COQ10AQ96MF6 247 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 FMO2Q99518 471 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 BPIFA1Q9NP55 256 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 SAYSD1Q9NPB0 183 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 CHRAC1Q9NRG0 131 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 ZSCAN32Q9NX65 697 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 IL17CQ9P0M4 197 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 PKP3Q9Y446 797 aa23.59■■□□□ 1.37
TSPAN4-203ENST00000397397 MROH6A6NGR9 719 aa23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 EIF3HO15372 352 aaKnown RBP eCLIP23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 RPP40O75818 363 aaKnown RBP23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 FSBPO95073 299 aa23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 TNFRSF8P28908 595 aa23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 PTPRCAPQ14761 206 aa23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 NAA30Q147X3 362 aaPredicted RBP23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 TMEM259Q4ZIN3 620 aa23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 TSTD2Q5T7W7 516 aa23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 RFLNAQ6ZTI6 216 aa23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 NLRP9Q7RTR0 991 aa23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 DEFB119Q8N690 84 aa23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 GPR161Q8N6U8 529 aaKnown RBP23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 OR4K2Q8NGD2 314 aa23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 PTCD2Q8WV60 388 aaKnown RBP23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 GAB3Q8WWW8 586 aa23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 STAMBPL1Q96FJ0 436 aa23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 SOX13Q9UN79 622 aa23.58■■□□□ 1.36
TSPAN4-203ENST00000397397 SCN8AQ9UQD0 1980 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 MAGEB16A2A368 324 aa23.57■■□□□ 1.36
TSPAN4-203ENST00000397397 E7ESA3 106 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms