RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 SMIM28A0A1B0GU29 152 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 VPS4BO75351 444 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 BEST1O76090 585 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 CCNA2P20248 432 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 GRIK2Q13002 908 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 KIF19Q2TAC6 998 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 AASDHQ4L235 1098 aaPredicted RBP8.71□□□□□ -1.02
BDNF-204ENST00000395980 FGD3Q5JSP0 725 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 RAB41Q5JT25 222 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 GRAMD4Q6IC98 578 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 NCCRP1Q6ZVX7 275 aaPredicted RBP8.71□□□□□ -1.02
BDNF-204ENST00000395980 CATSPER4Q7RTX7 472 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 DDIASQ8IXT1 998 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 ATPAF2Q8N5M1 289 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 SPATA22Q8NHS9 363 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 MAGED4Q96JG8 741 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 AKTIPQ9H8T0 292 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 GPN2Q9H9Y4 310 aaPredicted RBP8.71□□□□□ -1.02
BDNF-204ENST00000395980 MAGEE1Q9HCI5 957 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 SDR39U1Q9NRG7 319 aaPredicted RBP8.71□□□□□ -1.02
BDNF-204ENST00000395980 PCDHA9Q9Y5H5 950 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 NUP205Q92621 2012 aa8.71□□□□□ -1.02
BDNF-204ENST00000395980 TCRBV5S2A0A599 114 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 YJEFN3A6XGL0 299 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 UBFD1O14562 309 aaKnown RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 EI24O14681 340 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 SULT1C4O75897 302 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 PAPSS2O95340 614 aaPredicted RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 ARSAP15289 507 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 CAPN3P20807 821 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 RPL10P27635 214 aaKnown RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 AXLP30530 894 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 HERVK_113P63132 956 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 GSTM4Q03013 218 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 CBX2Q14781 532 aaPredicted RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 GRIK4Q16099 956 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 PITRM1Q5JRX3 1037 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 C16orf87Q6PH81 154 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 RANBP10Q6VN20 620 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 FAM110BQ8TC76 370 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 RAB2BQ8WUD1 216 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 LRRC58Q96CX6 371 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 NRBF2Q96F24 287 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 FBXL20Q96IG2 436 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 C16orf70Q9BSU1 422 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 ERVK-6Q9BXR3 956 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 UNKQ9C0B0 810 aaKnown RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 WDCPQ9H6R7 721 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 PDGFCQ9NRA1 345 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 GMIPQ9P107 970 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 SLC2A6Q9UGQ3 507 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 SFMBT1Q9UHJ3 866 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 SEC14L2O76054 403 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 ALDH2P05091 517 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 HOXB8P17481 243 aaPredicted RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 IREB2P48200 963 aaKnown RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 EEFSECP57772 596 aaKnown RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 TNK2Q07912 1038 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 UNC50Q53HI1 259 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 NANOGP8Q6NSW7 305 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 PHYKPLQ8IUZ5 450 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 SFRP1Q8N474 314 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 TANKQ92844 425 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 MED10Q9BTT4 135 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 ARNT2Q9HBZ2 717 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 GMPR2Q9P2T1 348 aaKnown RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 ANAPC2Q9UJX6 822 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 TLL2Q9Y6L7 1015 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 PAPPA2Q9BXP8 1791 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 CLDN5O00501 218 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 GABRDO14764 452 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 MATN3O15232 486 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 SEC24DO94855 1032 aaPredicted RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 LDLRP01130 860 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 MBL2P11226 248 aaPredicted RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 NCAM1P13591 858 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 BMXP51813 675 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 VGLL4Q14135 290 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 FXNQ16595 210 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 MARCH8Q5T0T0 291 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 HECTD2Q5U5R9 776 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 CLEC6AQ6EIG7 209 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 DCP1BQ8IZD4 617 aaKnown RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 TKTL2Q9H0I9 626 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 NXF3Q9H4D5 531 aaKnown RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 MROH8Q9H579 483 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 FBRSL1Q9HCM7 1045 aaKnown RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 PFDN4Q9NQP4 134 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 RIC8BQ9NVN3 520 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 TMEM45AQ9NWC5 275 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 PIM2Q9P1W9 311 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 IFT80Q9P2H3 777 aaPredicted RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 FAM149AA5PLN7 773 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 USP2O75604 605 aaPredicted RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 SUPT7LO94864 414 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 MT-CYBP00156 380 aaPredicted RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 LBPP18428 481 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 MAP4P27816 1152 aaKnown RBP8.7□□□□□ -1.02
BDNF-204ENST00000395980 OXTRP30559 389 aa8.7□□□□□ -1.02
BDNF-204ENST00000395980 HOXC13P31276 330 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms