RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 ZNF487B1APH4 448 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 APOL1O14791 398 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 RRP8O43159 456 aaKnown RBP13.75□□□□□ -0.21
CXCL12-205ENST00000395794 SPOPO43791 374 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 CSO75390 466 aaKnown RBP13.75□□□□□ -0.21
CXCL12-205ENST00000395794 MTA2O94776 668 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 KRT1P04264 644 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 MYCLP1P12525 358 aaPredicted RBP13.75□□□□□ -0.21
CXCL12-205ENST00000395794 TNNT1P13805 278 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 ACTN2P35609 894 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 ETV3P41162 512 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 MAGEA1P43355 309 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 NOP2P46087 812 aaKnown RBP13.75□□□□□ -0.21
CXCL12-205ENST00000395794 DSC2Q02487 901 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 SPA17Q15506 151 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 LRRC38Q5VT99 294 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 CDCP2Q5VXM1 449 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 C19orf48Q6RUI8 117 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 SARM1Q6SZW1 724 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 LRRC69Q6ZNQ3 347 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 RBM44Q6ZP01 1051 aaKnown RBP13.75□□□□□ -0.21
CXCL12-205ENST00000395794 HSD11B1LQ7Z5J1 315 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 VSIG1Q86XK7 387 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 LSMEM2Q8N112 164 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 OR6C4Q8NGE1 309 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 HNRNPLLQ8WVV9 542 aaKnown RBP13.75□□□□□ -0.21
CXCL12-205ENST00000395794 OR1E3Q8WZA6 343 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 GRAMD1AQ96CP6 724 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 HDAC11Q96DB2 347 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 DTD2Q96FN9 168 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 PDXPQ96GD0 296 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 MCCC1Q96RQ3 725 aaPredicted RBP13.75□□□□□ -0.21
CXCL12-205ENST00000395794 RBM15Q96T37 977 aaKnown RBP eCLIP13.75□□□□□ -0.21
CXCL12-205ENST00000395794 SYNDIG1Q9H7V2 258 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 CYP4F12Q9HCS2 524 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 DTLQ9NZJ0 730 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 GPSM3Q9Y4H4 160 aa13.75□□□□□ -0.21
CXCL12-205ENST00000395794 WDFY3Q8IZQ1 3526 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 FREM2Q5SZK8 3169 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 PPP1R12AO14974 1030 aaPredicted RBP13.74□□□□□ -0.21
CXCL12-205ENST00000395794 USP12O75317 370 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 TCEA3O75764 348 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 JCHAINP01591 159 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 CELA2BP08218 269 aaPredicted RBP13.74□□□□□ -0.21
CXCL12-205ENST00000395794 PDHA1P08559 390 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 ZNF30P17039 623 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 LHCGRP22888 699 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 RPL26P61254 145 aaKnown RBP13.74□□□□□ -0.21
CXCL12-205ENST00000395794 AP1B1Q10567 949 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 TBX2Q13207 712 aaPredicted RBP13.74□□□□□ -0.21
CXCL12-205ENST00000395794 PDK1Q15118 436 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 ALG1LQ6GMV1 187 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 RAET1GQ6H3X3 334 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 CRTC1Q6UUV9 634 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 Q6ZVL8 140 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 HEATR4Q86WZ0 1026 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 RFX6Q8HWS3 928 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 FAM46DQ8NEK8 389 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 PIH1D2Q8WWB5 315 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 CCDC3Q9BQI4 270 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 ADGRE3Q9BY15 652 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 FGF22Q9HCT0 170 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 RPL26L1Q9UNX3 145 aaKnown RBP13.74□□□□□ -0.21
CXCL12-205ENST00000395794 CHKBQ9Y259 395 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 PPIL1Q9Y3C6 166 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 ZZEF1O43149 2961 aa13.74□□□□□ -0.21
CXCL12-205ENST00000395794 DMXL2Q8TDJ6 3036 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 A0A0J9YYE9 177 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 KCNK1O00180 336 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 FZD6O60353 706 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 BRINP1O60477 761 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 TRBC1P01850 177 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 HLA-DQB2P05538 268 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 PYGLP06737 847 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 GM2AP17900 193 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 TGM2P21980 687 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 GPR1P46091 355 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 PPIDQ08752 370 aaKnown RBP13.73□□□□□ -0.21
CXCL12-205ENST00000395794 SLC10A2Q12908 348 aaPredicted RBP13.73□□□□□ -0.21
CXCL12-205ENST00000395794 PEX6Q13608 980 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 SPIDRQ14159 915 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 TCEAL1Q15170 157 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 ISXQ2M1V0 245 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 LRRC66Q68CR7 880 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 BZW1Q7L1Q6 419 aaKnown RBP13.73□□□□□ -0.21
CXCL12-205ENST00000395794 TSPAN33Q86UF1 283 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 CBARPQ8N350 705 aaPredicted RBP13.73□□□□□ -0.21
CXCL12-205ENST00000395794 KYQ8NBH2 561 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 LRRN4Q8WUT4 740 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 FGF11Q92914 225 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 RNF25Q96BH1 459 aaPredicted RBP13.73□□□□□ -0.21
CXCL12-205ENST00000395794 AP2M1Q96CW1 435 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 LGMNQ99538 433 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 LGR4Q9BXB1 951 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 TDRD1Q9BXT4 1180 aaKnown RBP13.73□□□□□ -0.21
CXCL12-205ENST00000395794 TEX101Q9BY14 249 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 BRD8Q9H0E9 1235 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 DPEP2Q9H4A9 486 aa13.73□□□□□ -0.21
CXCL12-205ENST00000395794 SUDS3Q9H7L9 328 aaPredicted RBP13.73□□□□□ -0.21
CXCL12-205ENST00000395794 CARS2Q9HA77 564 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms