RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ZFYVE19Q96K21 471 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 IL12RB2Q99665 862 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 TMEM248Q9NWD8 314 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 CASP8AP2Q9UKL3 1982 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 SMAD6O43541 496 aaKnown RBP15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 GLUD1P00367 558 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 FAM163BP0C2L3 166 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 YBEYP58557 167 aaPredicted RBP15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 LSM12Q3MHD2 195 aaKnown RBP15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 GK5Q6ZS86 529 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 NECAB2Q7Z6G3 386 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 PDZD8Q8NEN9 1154 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 KCNA7Q96RP8 456 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 TRIM8Q9BZR9 551 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 FBRSL1Q9HCM7 1045 aaKnown RBP15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 VPS45Q9NRW7 570 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 STOML1Q9UBI4 398 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 PRKAG3Q9UGI9 489 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 FETUBQ9UGM5 382 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 SPO11Q9Y5K1 396 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 RAD54BQ9Y620 910 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 WNT6Q9Y6F9 365 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 NUMBLQ9Y6R0 609 aa15.91■□□□□ 0.14
SMARCD1-202ENST00000394963 PPP6CO00743 305 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 HDAC3O15379 428 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 UBTFL6P0CB48 400 aaPredicted RBP15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 CDH4P55283 916 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 RANBP10Q6VN20 620 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 SH3RF2Q8TEC5 729 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 CDH19Q9H159 772 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 EML4Q9HC35 981 aaKnown RBP15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 NDE1Q9NXR1 346 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 SLCO3A1Q9UIG8 710 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 ARHGAP26Q9UNA1 814 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 PHF24Q9UPV7 400 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 SCN4AP35499 1836 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 MAP3K7O43318 606 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 CHEK2O96017 543 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 SOD2P04179 222 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 FGF1P05230 155 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 CCND1P24385 295 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 GGT5P36269 586 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 CYLC2Q14093 348 aaPredicted RBP15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 TMPRSS6Q8IU80 811 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 ICA1LQ8NDH6 482 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 LINGO1Q96FE5 620 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 KIFC1Q9BW19 673 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 WASF2Q9Y6W5 498 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 A0A0C4DFX4 3053 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 GRXCR1A8MXD5 290 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 INPP4BO15327 924 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 FGBP02675 491 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 ADH1AP07327 375 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 RBP1P09455 135 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 CDKN2DP55273 166 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 IMPG1Q17R60 797 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 PABPC1LQ4VXU2 614 aaKnown RBP15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 CES4AQ5XG92 561 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 MILR1Q7Z6M3 343 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 UMODL1-AS1Q8N2C9 162 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 TXNDC5Q8NBS9 432 aaKnown RBP15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 OR9I1Q8NGQ6 314 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 IMP4Q96G21 291 aaKnown RBP15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 C7orf26Q96N11 449 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 TMEM51Q9NW97 253 aa15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 MRPS23Q9Y3D9 190 aaKnown RBP15.9■□□□□ 0.14
SMARCD1-202ENST00000394963 TRAV19A0A0A6YYK7 116 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 CDC7O00311 574 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 UBDO15205 165 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 BIRC5O15392 142 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 CLDN7O95471 211 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 JUNP05412 331 aaKnown RBP15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 KCNA5P22460 613 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 CES1P23141 567 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 ATP5F1P24539 256 aaPredicted RBP15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 SUGP1Q8IWZ8 645 aaKnown RBP15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 LMNTD2Q8IXW0 634 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 BADQ92934 168 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 NSUN5Q96P11 429 aaKnown RBP15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 SIRPGQ9P1W8 387 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 TPBGLP0DKB5 382 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 T-ENOLP0DO92 83 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 HLA-DPA1P20036 260 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 HMOX2P30519 316 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 PPP1R3AQ16821 1122 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 RPAINQ86UA6 219 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 SLC39A3Q9BRY0 314 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 MRPL1Q9BYD6 325 aaKnown RBP15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 MAGEH1Q9H213 219 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 VPS51Q9UID3 782 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 NUMA1Q14980 2115 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 TGM5O43548 720 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 ZCCHC18P0CG32 403 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 EEF1DP29692 281 aaKnown RBP15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 CNKSR3Q6P9H4 555 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 GRASPQ7Z6J2 395 aaPredicted RBP15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 CUZD1Q86UP6 607 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 LRGUKQ96M69 825 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 TSGA13Q96PP4 275 aa15.89■□□□□ 0.13
SMARCD1-202ENST00000394963 GPR22Q99680 433 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms