RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 C22orf39Q6P5X5 142 aa14.97□□□□□ -0.01
CCT4-201ENST00000394440 ZNF549Q6P9A3 640 aa14.97□□□□□ -0.01
CCT4-201ENST00000394440 EFHBQ8N7U6 833 aa14.97□□□□□ -0.01
CCT4-201ENST00000394440 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.97□□□□□ -0.01
CCT4-201ENST00000394440 KIAA1958Q8N8K9 716 aa14.97□□□□□ -0.01
CCT4-201ENST00000394440 GBP7Q8N8V2 638 aaPredicted RBP14.97□□□□□ -0.01
CCT4-201ENST00000394440 VN1R2Q8NFZ6 395 aa14.97□□□□□ -0.01
CCT4-201ENST00000394440 FAM45AQ8TCE6 357 aa14.97□□□□□ -0.01
CCT4-201ENST00000394440 NXNL1Q96CM4 212 aa14.97□□□□□ -0.01
CCT4-201ENST00000394440 LRRC3BQ96PB8 259 aa14.97□□□□□ -0.01
CCT4-201ENST00000394440 LMAN2LQ9H0V9 348 aa14.97□□□□□ -0.01
CCT4-201ENST00000394440 ACTR5Q9H9F9 607 aaPredicted RBP14.97□□□□□ -0.01
CCT4-201ENST00000394440 DCTN4Q9UJW0 460 aa14.97□□□□□ -0.01
CCT4-201ENST00000394440 ZNF711Q9Y462 761 aa14.97□□□□□ -0.01
CCT4-201ENST00000394440 A0A1W2PPC1 479 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.96□□□□□ -0.01
CCT4-201ENST00000394440 MYO1CO00159 1063 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 ITM2AO43736 263 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 PRSS56P0CW18 603 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 RALBP11234 206 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 BMP1P13497 986 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 BCL2L1Q07817 233 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 ZYG11AQ6WRX3 759 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 C12orf76Q8N812 135 aaPredicted RBP14.96□□□□□ -0.01
CCT4-201ENST00000394440 EID2BQ96D98 161 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 TSPAN17Q96FV3 270 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 UBXN10Q96LJ8 280 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 TSNARE1Q96NA8 513 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 PBX4Q9BYU1 374 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 TNKS2Q9H2K2 1166 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 TLE6Q9H808 572 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 IGSF5Q9NSI5 407 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 INTS10Q9NVR2 710 aaKnown RBP14.96□□□□□ -0.01
CCT4-201ENST00000394440 IL17CQ9P0M4 197 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 RUVBL2Q9Y230 463 aaKnown RBP14.96□□□□□ -0.01
CCT4-201ENST00000394440 VWA7Q9Y334 891 aa14.96□□□□□ -0.01
CCT4-201ENST00000394440 DNAJC6O75061 913 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 FSBPO95073 299 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 HOXB8P17481 243 aaPredicted RBP14.96□□□□□ -0.02
CCT4-201ENST00000394440 FDXRP22570 491 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 GKP32189 559 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 SLC12A2P55011 1212 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 CDKN2DP55273 166 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 TIAL1Q01085 375 aaKnown RBP eCLIP14.96□□□□□ -0.02
CCT4-201ENST00000394440 ITGA9Q13797 1035 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 DMC1Q14565 340 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 CCDC91Q7Z6B0 441 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 ADIPOR2Q86V24 386 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 PPP1R14CQ8TAE6 165 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 SORT1Q99523 831 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 CEP44Q9C0F1 390 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 OXSMQ9NWU1 459 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 CPSF2Q9P2I0 782 aaKnown RBP14.96□□□□□ -0.02
CCT4-201ENST00000394440 XPR1Q9UBH6 696 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 FKBPLQ9UIM3 349 aa14.96□□□□□ -0.02
CCT4-201ENST00000394440 A0A0J9YYE9 177 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 SLC9A3R1O14745 358 aaPredicted RBP14.95□□□□□ -0.02
CCT4-201ENST00000394440 LYPLA1O75608 230 aaPredicted RBP14.95□□□□□ -0.02
CCT4-201ENST00000394440 DCTN3O75935 186 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 TRBC1P01850 177 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 HMGCLP35914 325 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 SCTRP47872 440 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 NRIP1P48552 1158 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 SLC1A6P48664 564 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 SUOXP51687 545 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 EPHB1P54762 984 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 SNRPD1P62314 119 aaKnown RBP14.95□□□□□ -0.02
CCT4-201ENST00000394440 PEX6Q13608 980 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 CRLF3Q8IUI8 442 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 CELF5Q8N6W0 485 aaKnown RBP14.95□□□□□ -0.02
CCT4-201ENST00000394440 LPGAT1Q92604 370 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 RSPRY1Q96DX4 576 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 C19orf43Q9BQ61 176 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 ATP13A3Q9H7F0 1226 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 PIDD1Q9HB75 910 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 FBXO10Q9UK96 956 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 CRYL1Q9Y2S2 319 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 A0A0G2JND7 137 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 ALPIP09923 528 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 SLC26A3P40879 764 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 GLRBP48167 497 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 ARFIP2P53365 341 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 SULT2A1Q06520 285 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 ACTN3Q08043 901 aaPredicted RBP14.95□□□□□ -0.02
CCT4-201ENST00000394440 BNIP1Q12981 228 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 CDKN3Q16667 212 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 HSF5Q4G112 596 aaPredicted RBP14.95□□□□□ -0.02
CCT4-201ENST00000394440 TMC5Q6UXY8 1006 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 SDCCAG8Q86SQ7 713 aaPredicted RBP14.95□□□□□ -0.02
CCT4-201ENST00000394440 TBC1D1Q86TI0 1168 aaPredicted RBP14.95□□□□□ -0.02
CCT4-201ENST00000394440 ZSWIM9Q86XI8 627 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 HEXDCQ8WVB3 486 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 ECHDC3Q96DC8 303 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 TCF12Q99081 682 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 TMEM120AQ9BXJ8 343 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 SLC2A11Q9BYW1 496 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 SFXN1Q9H9B4 322 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 SLC25A13Q9UJS0 675 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 NUMBLQ9Y6R0 609 aa14.95□□□□□ -0.02
CCT4-201ENST00000394440 A0A0U1RQS6 177 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms