RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 TMEM161BQ8NDZ6 487 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 UFD1Q92890 307 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 ZNF649Q9BS31 505 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 STARD7Q9NQZ5 370 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 POLR3BQ9NW08 1133 aaPredicted RBP13.43□□□□□ -0.26
USP49-203ENST00000394253 C14orf166Q9Y224 244 aaKnown RBP13.43□□□□□ -0.26
USP49-203ENST00000394253 ADAMDEC1O15204 470 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 PRKAB2O43741 272 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 SSX5O60225 188 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 PLEKHG6Q3KR16 790 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 C2orf76Q3KRA6 126 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 GARNL3Q5VVW2 1013 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 ZCCHC9Q8N567 271 aaKnown RBP13.43□□□□□ -0.26
USP49-203ENST00000394253 OXR1Q8N573 874 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 TRIM36Q9NQ86 728 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 MOCS1Q9NZB8 636 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 PDLIM1O00151 329 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 MT-CO1P00395 513 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 PCSK2P16519 638 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 SNAP47Q5SQN1 464 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 ZNF517Q6ZMY9 492 aaPredicted RBP13.43□□□□□ -0.26
USP49-203ENST00000394253 SSX6Q7RTT6 188 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 GALNT7Q86SF2 657 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 ACMSDQ8TDX5 336 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 PPP1R13LQ8WUF5 828 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 DHRS1Q96LJ7 313 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 PANX1Q96RD7 426 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 LGR4Q9BXB1 951 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 SLC4A5Q9BY07 1137 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 RCOR3Q9P2K3 495 aaPredicted RBP13.43□□□□□ -0.26
USP49-203ENST00000394253 RBAK-RBAKDNI3L0D1 243 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 GNALP38405 381 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 GNA12Q03113 381 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 ADAM15Q13444 863 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 GPR158Q5T848 1215 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 LAPTM4BQ86VI4 370 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 RDH11Q8TC12 318 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 ATG4AQ8WYN0 398 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 TLR8Q9NR97 1041 aaKnown RBP13.42□□□□□ -0.26
USP49-203ENST00000394253 PCDHGB2Q9Y5G2 931 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 RHPN2P1A8MT19 583 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 CKMP06732 381 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 ALDH4A1P30038 563 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 RPL22P35268 128 aaKnown RBP13.42□□□□□ -0.26
USP49-203ENST00000394253 ACOX1Q15067 660 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 SNAPC1Q16533 368 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 TMEM44Q2T9K0 475 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 PRICKLE1Q96MT3 831 aaPredicted RBP13.42□□□□□ -0.26
USP49-203ENST00000394253 OR5B12Q96R08 314 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 TCEAL7Q9BRU2 100 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 RANBP3Q9H6Z4 567 aaPredicted RBP13.42□□□□□ -0.26
USP49-203ENST00000394253 PCDHGB1Q9Y5G3 927 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 CPNE3O75131 537 aaKnown RBP13.42□□□□□ -0.26
USP49-203ENST00000394253 SLC2A2P11168 524 aaPredicted RBP13.42□□□□□ -0.26
USP49-203ENST00000394253 SERPINA4P29622 427 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 ZYG11AQ6WRX3 759 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 PQLC1Q8N2U9 271 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 SETD6Q8TBK2 473 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 SMURF1Q9HCE7 757 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 UBQLN2Q9UHD9 624 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 C2orf74A8MZ97 194 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 CDC25CP30307 473 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 TTPAP49638 278 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 AARDQ4LEZ3 155 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 SLC16A9Q7RTY1 509 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 ITIH5Q86UX2 942 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 MRPS31Q92665 395 aaKnown RBP13.42□□□□□ -0.26
USP49-203ENST00000394253 SMARCD1Q96GM5 515 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 SAV1Q9H4B6 383 aaPredicted RBP13.42□□□□□ -0.26
USP49-203ENST00000394253 CLUHO75153 1309 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 ATRXP46100 2492 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 TTC37Q6PGP7 1564 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 WDR27A2RRH5 827 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 RPLP0P05388 317 aaKnown RBP13.42□□□□□ -0.26
USP49-203ENST00000394253 DLSTP36957 453 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 SCNN1BP51168 640 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 NOL9Q5SY16 702 aaKnown RBP13.42□□□□□ -0.26
USP49-203ENST00000394253 VWA5B1Q5TIE3 1220 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 PAMR1Q6UXH9 720 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 ZNF563Q8TA94 476 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 TBL1YQ9BQ87 522 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 TMEM184CQ9NVA4 438 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 RHOCP08134 193 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 TDGQ13569 410 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 ATXN7L2Q5T6C5 722 aaPredicted RBP13.42□□□□□ -0.26
USP49-203ENST00000394253 CYP2U1Q7Z449 544 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 SEC14L3Q9UDX4 400 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 BRWD1Q9NSI6 2320 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 C1orf196B1AJZ1 125 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 CYP27B1O15528 508 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 ASMTP46597 345 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 RNASE12Q5GAN4 147 aaKnown RBP13.42□□□□□ -0.26
USP49-203ENST00000394253 PARP8Q8N3A8 854 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 MFSD8Q8NHS3 518 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 DPF3Q92784 378 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 ADAM28Q9UKQ2 775 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 TBX20Q9UMR3 447 aa13.42□□□□□ -0.26
USP49-203ENST00000394253 QSOX1O00391 747 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 CCR1P32246 355 aa13.41□□□□□ -0.26
USP49-203ENST00000394253 ENGASEQ8NFI3 743 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms