RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PIK3C3Q8NEB9 887 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 SLC9A6Q92581 669 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 FEM1CQ96JP0 617 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 GFM1Q96RP9 751 aaKnown RBP7.64□□□□□ -1.19
VTI1A-201ENST00000393077 UNC93B1Q9H1C4 597 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 MMP27Q9H306 513 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 ADAMTS10Q9H324 1103 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 NUFIP1Q9UHK0 495 aaKnown RBP7.64□□□□□ -1.19
VTI1A-201ENST00000393077 MKLN1Q9UL63 735 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 ATP8B3O60423 1300 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 CNTNAP2Q9UHC6 1331 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 BHMG1C9JSJ3 638 aaPredicted RBP7.64□□□□□ -1.19
VTI1A-201ENST00000393077 SGCEO43556 437 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 HUS1O60921 280 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 FAM86B2P0C5J1 330 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 TSHRP16473 764 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 NUP62P37198 522 aaPredicted RBP7.64□□□□□ -1.19
VTI1A-201ENST00000393077 GMPSP49915 693 aaPredicted RBP7.64□□□□□ -1.19
VTI1A-201ENST00000393077 PGDP52209 483 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 KPNA2P52292 529 aaKnown RBP7.64□□□□□ -1.19
VTI1A-201ENST00000393077 DGKQP52824 942 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 OSTNP61366 133 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 CXCL9Q07325 125 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 CEACAM7Q14002 265 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 TFDP2Q14188 446 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 HIST2H2ACQ16777 129 aaPredicted RBP7.64□□□□□ -1.19
VTI1A-201ENST00000393077 DUSP7Q16829 419 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 FAM45BPQ6NSW5 357 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 RNF111Q6ZNA4 994 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 DPH6Q7L8W6 267 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 METTL23Q86XA0 190 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 PLCZ1Q86YW0 608 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 SPPL2CQ8IUH8 684 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF540Q8NDQ6 660 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 SETD9Q8NE22 299 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 SHKBP1Q8TBC3 707 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 TEX47Q8TBZ9 253 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 FAM151AQ8WW52 585 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 ARL5BQ96KC2 179 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 SH2D3AQ9BRG2 576 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 B3GNT4Q9C0J1 378 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 ROGDIQ9GZN7 287 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 PLSCR3Q9NRY6 295 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 NYAP2Q9P242 653 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 PRR12Q9ULL5 1215 aa7.64□□□□□ -1.19
VTI1A-201ENST00000393077 PARP4Q9UKK3 1724 aaKnown RBP7.64□□□□□ -1.19
VTI1A-201ENST00000393077 A0A0B4J203 849 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 A0A0B4J269 797 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 FAM240BA0A1B0GVZ2 78 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 CCDC154A6NI56 674 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 KATNA1O75449 491 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SOAT2O75908 522 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 FADS2O95864 444 aaKnown RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 POU1F1P28069 291 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 ELK4P28324 431 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 CRHR1P34998 444 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 RPL14P50914 215 aaKnown RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 CYP4F2P78329 520 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 CYP4F3Q08477 520 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 MAB21L1Q13394 359 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 RBM48Q5RL73 367 aaKnown RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 DACT2Q5SW24 774 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 FIP1L1Q6UN15 594 aaKnown RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SPATC1Q76KD6 591 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 R3HCC1LQ7Z5L2 792 aaKnown RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 BTLAQ7Z6A9 289 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 TIGD4Q8IY51 512 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 CNTD1Q8N815 330 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 RHOXF1Q8NHV9 184 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 TFAP2CQ92754 450 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 PNMA5Q96PV4 448 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 MND1Q9BWT6 205 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 VRTNQ9H8Y1 702 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 ANKHQ9HCJ1 492 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 RNF181Q9P0P0 153 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 COPZ2Q9P299 210 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 VTI1BQ9UEU0 232 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 MAGED2Q9UNF1 606 aaPredicted RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 COL14A1Q05707 1796 aaKnown RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 PHLPP1O60346 1717 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 KCNN4O15554 427 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 H2AFYO75367 372 aaKnown RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 GCATO75600 419 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 PIGNO95427 931 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 MT-ND1P03886 318 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 THRBP10828 461 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF26P17031 533 aaPredicted RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 TGM1P22735 817 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SHMT1P34896 483 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 VASPP50552 380 aaPredicted RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 FXR2P51116 673 aaKnown RBP eCLIP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 HMGCS2P54868 508 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SESN2P58004 480 aaPredicted RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 MS4A2Q01362 244 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SPIRE1Q08AE8 756 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 TFDP3Q5H9I0 405 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 FOXR2Q6PJQ5 311 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 MFSD7Q6UXD7 560 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 EIF3MQ7L2H7 374 aaKnown RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SLC47A2Q86VL8 602 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms