RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 ITM2BQ9Y287 266 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 PCDHGA10Q9Y5H3 936 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 CACNA1EQ15878 2313 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 KNL1Q8NG31 2342 aa6.78□□□□□ -1.32
UBBP1-201ENST00000392399 TRPM6Q9BX84 2022 aa6.77□□□□□ -1.32
UBBP1-201ENST00000392399 A0A1W2PR77 199 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 NPIPB15A6NHN6 443 aaPredicted RBP6.77□□□□□ -1.33
UBBP1-201ENST00000392399 A6NNZ2 444 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 CCDC188H7C350 402 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 TLR4O00206 839 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 PDE2AO00408 941 aaPredicted RBP6.77□□□□□ -1.33
UBBP1-201ENST00000392399 WNT9AO14904 365 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 ZNF185O15231 689 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 PHF2O75151 1096 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 PPFIA2O75334 1257 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 RECQL5O94762 991 aaPredicted RBP6.77□□□□□ -1.33
UBBP1-201ENST00000392399 METTL18O95568 372 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 AP2A1O95782 977 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 GAS8O95995 478 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 CFIP05156 583 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 PYGLP06737 847 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 HOXC4P09017 264 aaPredicted RBP6.77□□□□□ -1.33
UBBP1-201ENST00000392399 CTPS1P17812 591 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 SDHBP21912 280 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 PSMB4P28070 264 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 TEAD1P28347 426 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 ADRA1AP35348 466 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 COILP38432 576 aaPredicted RBP6.77□□□□□ -1.33
UBBP1-201ENST00000392399 RABIFP47224 123 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 KCNJ1P48048 391 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 ATXN3P54252 364 aaPredicted RBP6.77□□□□□ -1.33
UBBP1-201ENST00000392399 GDF10P55107 478 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 C21orf59P57076 290 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 IRX4P78413 519 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 ARHGAP8P85298 464 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 CDK16Q00536 496 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 PDE1BQ01064 536 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 PTSQ03393 145 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 DPTQ07507 201 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 RALGDSQ12967 914 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 MTM1Q13496 603 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 SEMA5AQ13591 1074 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 PTK2BQ14289 1009 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 FGL2Q14314 439 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 ACOX1Q15067 660 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 SLC1A5Q15758 541 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 CNGA3Q16281 694 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 PCSK7Q16549 785 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 CDKN3Q16667 212 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 LRRC73Q5JTD7 316 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 ZDHHC20Q5W0Z9 365 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 KCTD11Q693B1 232 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 CCDC137Q6PK04 289 aaKnown RBP6.77□□□□□ -1.33
UBBP1-201ENST00000392399 SYT10Q6XYQ8 523 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 KYAT3Q6YP21 454 aaKnown RBP6.77□□□□□ -1.33
UBBP1-201ENST00000392399 PRR23CQ6ZRP0 262 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 ZNF765Q7L2R6 523 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 KDELC2Q7Z4H8 507 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 TMC3Q7Z5M5 1100 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 ZCCHC9Q8N567 271 aaKnown RBP6.77□□□□□ -1.33
UBBP1-201ENST00000392399 DCLK2Q8N568 766 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 IPMKQ8NFU5 416 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 KLK6Q92876 244 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 KLHDC7BQ96G42 594 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 BMFQ96LC9 184 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 COQ10AQ96MF6 247 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 SLC6A18Q96N87 628 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 KLF6Q99612 283 aaPredicted RBP6.77□□□□□ -1.33
UBBP1-201ENST00000392399 WRAP53Q9BUR4 548 aaKnown RBP6.77□□□□□ -1.33
UBBP1-201ENST00000392399 AP1M1Q9BXS5 423 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 ERVMER34-1Q9H9K5 563 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 ZFYVE1Q9HBF4 777 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 PKD2L2Q9NZM6 624 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 GGT7Q9UJ14 662 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 ANKRD6Q9Y2G4 727 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 PI4KAP42356 2102 aa6.77□□□□□ -1.33
UBBP1-201ENST00000392399 CEP192Q8TEP8 1941 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.76□□□□□ -1.33
UBBP1-201ENST00000392399 C1orf232A0A0U1RR37 186 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 C2orf81A6NN90 581 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 A8MX80 341 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 E7EVH7 732 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 YKT6O15498 198 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 SUN1O94901 812 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 CLDN7O95471 211 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 CER1O95813 267 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 AGTP01019 485 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 KRT14P02533 472 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 PRKCGP05129 697 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 ALPIP09923 528 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 ATXN1LP0C7T5 689 aaKnown RBP6.76□□□□□ -1.33
UBBP1-201ENST00000392399 THEGLP0DJG4 465 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 TSHRP16473 764 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 ENGP17813 658 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 LHCGRP22888 699 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 RPL22P35268 128 aaKnown RBP6.76□□□□□ -1.33
UBBP1-201ENST00000392399 HMGCLP35914 325 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 TRIM23P36406 574 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 SPINT3P49223 89 aa6.76□□□□□ -1.33
UBBP1-201ENST00000392399 CSNK1EP49674 416 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms