RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 HBEGFQ99075 208 aa16.53■□□□□ 0.24
SNX9-201ENST00000392185 WRAP53Q9BUR4 548 aaKnown RBP16.53■□□□□ 0.24
SNX9-201ENST00000392185 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.53■□□□□ 0.247e-6■□□□□ 9.4
SNX9-201ENST00000392185 CROTQ9UKG9 612 aa16.53■□□□□ 0.24
SNX9-201ENST00000392185 EVPLQ92817 2033 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 GLYATL1P3A0A0U1RQE8 302 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 NEMP2A6NFY4 417 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 IQCF5A8MTL0 148 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 HAS3O00219 553 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 INPPL1O15357 1258 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 PAFAH1B3Q15102 231 aaKnown RBP16.52■□□□□ 0.24
SNX9-201ENST00000392185 CLLU1OSQ5K130 101 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 C1orf50Q9BV19 199 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 DUS2Q9NX74 493 aaKnown RBP16.52■□□□□ 0.24
SNX9-201ENST00000392185 SLC2A6Q9UGQ3 507 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 INSL5Q9Y5Q6 135 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 PRR5-ARHGAP8B1AHC4 643 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 AGRPO00253 132 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 BIRC5O15392 142 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 SOD2P04179 222 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 HGFP14210 728 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 LBX1P52954 281 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 ARHGAP8P85298 464 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 PLOD1Q02809 727 aaPredicted RBP16.52■□□□□ 0.24
SNX9-201ENST00000392185 GPM6BQ13491 265 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 ARL13AQ5H913 290 aaPredicted RBP16.52■□□□□ 0.24
SNX9-201ENST00000392185 TDRPQ86YL5 185 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 FLCNQ8NFG4 579 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 ZSCAN18Q8TBC5 510 aaPredicted RBP16.52■□□□□ 0.24
SNX9-201ENST00000392185 SEPHS2Q99611 448 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 GATA5Q9BWX5 397 aaPredicted RBP16.52■□□□□ 0.24
SNX9-201ENST00000392185 YY1AP1Q9H869 796 aa16.52■□□□□ 0.24
SNX9-201ENST00000392185 CDK14O94921 469 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 LBPP18428 481 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 HCAR3P49019 387 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 THOP1P52888 689 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 ADAMTSL2Q86TH1 951 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 OOSP2Q86WS3 158 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 UBR3Q6ZT12 1888 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 TMEM114B3SHH9 223 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 MAP3K13O43283 966 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 VHLP40337 213 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 HNF4AP41235 474 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 SLC1A2P43004 574 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 GALNT2Q10471 571 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 RNF43Q68DV7 783 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 BRSK1Q8TDC3 778 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 KLHL32Q96NJ5 620 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 YIPF3Q9GZM5 350 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 ADNPQ9H2P0 1102 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 USP29Q9HBJ7 922 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 PNPLA8Q9NP80 782 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 SAR1AQ9NR31 198 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 ZNF180Q9UJW8 692 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 TNPO3Q9Y5L0 923 aaKnown RBP16.52■□□□□ 0.23
SNX9-201ENST00000392185 TEX264Q9Y6I9 313 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 SQORQ9Y6N5 450 aa16.52■□□□□ 0.23
SNX9-201ENST00000392185 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.51■□□□□ 0.23
SNX9-201ENST00000392185 A0A0D9SEW6 157 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 CCDC162PA2VCL2 907 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 OR2AG2A6NM03 316 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 LINC00032P0C843 101 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 GRK3P35626 688 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 SULT2A1Q06520 285 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 ACSM2AQ08AH3 577 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 IRF5Q13568 498 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 CCDC157Q569K6 752 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 ACSM2BQ68CK6 577 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 GRAMD4Q6IC98 578 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 NAPRTQ6XQN6 538 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 FSTL5Q8N475 847 aaPredicted RBP16.51■□□□□ 0.23
SNX9-201ENST00000392185 OR8D1Q8WZ84 308 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 LZICQ8WZA0 190 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 NPEPPSL1A6NEC2 478 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 PTPRCAPQ14761 206 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 KPNB1Q14974 876 aaKnown RBP16.51■□□□□ 0.23
SNX9-201ENST00000392185 PSRC1Q6PGN9 363 aaPredicted RBP16.51■□□□□ 0.23
SNX9-201ENST00000392185 POF1BQ8WVV4 589 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 EIF2B3Q9NR50 452 aaKnown RBP16.51■□□□□ 0.23
SNX9-201ENST00000392185 NCKAP1Q9Y2A7 1128 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 ARIH1Q9Y4X5 557 aaPredicted RBP16.51■□□□□ 0.23
SNX9-201ENST00000392185 TIMM22Q9Y584 194 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 KCTD3Q9Y597 815 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 SHANK3Q9BYB0 1731 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 TOP3BO95985 862 aaKnown RBP16.51■□□□□ 0.23
SNX9-201ENST00000392185 UGT1A6P19224 532 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 UGT1A1P22309 533 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 UGT1A4P22310 534 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 UGT1A3P35503 534 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 UGT1A5P35504 534 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 KLC1Q07866 573 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 SFSWAPQ12872 951 aaKnown RBP16.51■□□□□ 0.23
SNX9-201ENST00000392185 PDE1CQ14123 709 aaPredicted RBP16.51■□□□□ 0.23
SNX9-201ENST00000392185 TRMT5Q32P41 509 aaKnown RBP16.51■□□□□ 0.23
SNX9-201ENST00000392185 GRASPQ7Z6J2 395 aaPredicted RBP16.51■□□□□ 0.23
SNX9-201ENST00000392185 BANPQ8N9N5 519 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 WNT6Q9Y6F9 365 aa16.51■□□□□ 0.23
SNX9-201ENST00000392185 SRRM3A6NNA2 597 aaPredicted RBP16.5■□□□□ 0.23
SNX9-201ENST00000392185 ATP6V1G2O95670 118 aa16.5■□□□□ 0.23
SNX9-201ENST00000392185 KLHL23Q8NBE8 558 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms